- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-14-14-1-1-mer
- Ligands
- 32 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)
- 2 x BPB: BACTERIOPHEOPHYTIN B(Non-covalent)
BPB.3: 23 residues within 4Å:- Chain A: A.43, G.46, A.97, F.98, W.101, E.105, I.118, A.121, F.122, A.125, Y.149, G.150, V.242
- Chain B: Y.211, A.214, L.215, A.218, M.219, W.253, M.257
- Ligands: BCL.1, BCL.2, U10.12
13 PLIP interactions:4 interactions with chain B, 9 interactions with chain A- Hydrophobic interactions: B:Y.211, B:A.214, B:L.215, B:A.218, A:A.97, A:A.121, A:F.122, A:F.122, A:F.122, A:A.125, A:Y.149, A:V.242, A:V.242
BPB.11: 20 residues within 4Å:- Chain A: F.182, A.185, L.186, A.189, L.190, L.220
- Chain B: S.60, G.64, F.68, A.126, V.127, W.130, T.147, A.150, F.151, A.154, A.274, T.278
- Ligands: BCL.7, BCL.10
13 PLIP interactions:10 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:F.68, B:F.68, B:W.130, B:A.150, B:F.151, B:F.151, B:F.151, B:A.154, B:A.274, A:A.185, A:A.189, A:L.190
- pi-Stacking: B:F.151
- 9 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)
PC1.4: 10 residues within 4Å:- Chain A: A.51, G.58, T.59, W.60, N.61, P.62, I.65
- Chain F: L.33
- Ligands: PC1.15, CDL.18
8 PLIP interactions:7 interactions with chain A, 1 interactions with chain F- Hydrophobic interactions: A:A.51, A:W.60, A:W.60, A:I.65, F:L.33
- Hydrogen bonds: A:T.59, A:W.60, A:N.61
PC1.6: 13 residues within 4Å:- Chain 1: R.15, V.18, V.22
- Chain 5: K.29, G.30, W.33, V.37
- Chain A: T.16, L.17, V.18, G.19, F.35, L.103
9 PLIP interactions:5 interactions with chain 5, 2 interactions with chain 1, 2 interactions with chain A- Hydrophobic interactions: 5:W.33, 5:W.33, 5:V.37, 1:V.22, A:F.35
- Salt bridges: 5:K.29, 5:K.29, 1:R.15
- Hydrogen bonds: A:G.19
PC1.15: 18 residues within 4Å:- Chain A: P.62, Q.63, I.151
- Chain B: P.201, L.205, A.208, W.298, H.302, M.304
- Chain C: N.9, F.10, S.14, I.17, Y.18, W.21
- Ligands: BCL.2, PC1.4, CDL.18
10 PLIP interactions:3 interactions with chain B, 2 interactions with chain A, 5 interactions with chain C- Hydrophobic interactions: B:L.205, B:A.208, A:I.151, C:W.21
- Salt bridges: B:H.302
- Hydrogen bonds: A:Q.63, C:N.9, C:N.9, C:S.14, C:Y.18
PC1.16: 20 residues within 4Å:- Chain A: P.29
- Chain B: R.254, M.257, G.258, F.259, W.269, W.272, M.273
- Chain C: I.28, L.31, Q.32, M.36, Y.40, L.42, N.52
- Chain D: R.15
- Ligands: BCL.1, BCL.2, U10.12, PC1.17
14 PLIP interactions:8 interactions with chain B, 6 interactions with chain C- Hydrophobic interactions: B:F.259, B:F.259, B:F.259, B:F.259, B:W.269, B:W.269, B:W.272, C:I.28, C:I.28, C:L.31
- Salt bridges: B:R.254
- Hydrogen bonds: C:Q.32, C:Y.40, C:Y.40
PC1.17: 6 residues within 4Å:- Chain A: F.30
- Chain C: P.55, F.56
- Ligands: PC1.16, PC1.22, PC1.27
No protein-ligand interaction detected (PLIP)PC1.20: 21 residues within 4Å:- Chain 3: F.11, R.15, V.16
- Chain A: A.2, V.27, G.28
- Chain C: N.44, N.52, E.94
- Chain D: D.12, R.14, R.15, F.17, V.18, A.19, G.21, V.22, F.25
- Ligands: BCL.19, PC1.22, SPO.73
13 PLIP interactions:6 interactions with chain D, 5 interactions with chain 3, 2 interactions with chain C- Hydrophobic interactions: D:V.18, D:V.22, D:V.22, 3:F.11, 3:R.15, 3:V.16
- Salt bridges: D:D.12, D:R.14, D:R.15, 3:R.15, 3:R.15, C:E.94
- Hydrogen bonds: C:E.94
PC1.22: 21 residues within 4Å:- Chain C: A.51, N.52, Q.53, G.54
- Chain D: F.11, D.12, R.15, V.16, A.19, F.23
- Chain F: R.14, R.15, F.17, V.18, G.21, V.22, F.25
- Ligands: PC1.17, PC1.20, BCL.24, SPO.26
4 PLIP interactions:3 interactions with chain D, 1 interactions with chain F- Hydrophobic interactions: D:F.23, F:F.25
- Hydrogen bonds: D:D.12, D:R.15
PC1.27: 17 residues within 4Å:- Chain C: Y.29, P.55, F.56, P.57
- Chain F: F.11, D.12, R.15, V.16, F.23
- Chain H: R.14, R.15, V.18, G.21, V.22, F.25
- Ligands: PC1.17, BCL.30
12 PLIP interactions:4 interactions with chain C, 5 interactions with chain F, 3 interactions with chain H- Hydrophobic interactions: C:Y.29, C:P.55, C:F.56, C:F.56, F:F.11, F:V.16, F:F.23, H:V.18, H:V.22, H:F.25
- Hydrogen bonds: F:D.12
- Salt bridges: F:R.15
PC1.58: 15 residues within 4Å:- Chain A: W.272, W.273, I.276, P.277
- Chain B: N.82, A.84, L.87
- Chain T: M.30, I.34
- Chain V: V.29, L.33, L.36, S.37, N.42, E.45
7 PLIP interactions:1 interactions with chain A, 3 interactions with chain V, 2 interactions with chain B, 1 interactions with chain T- Hydrophobic interactions: A:W.273, V:L.33, B:L.87, T:I.34
- Hydrogen bonds: V:N.42, B:N.82
- Salt bridges: V:E.45
- 4 x U10: UBIQUINONE-10(Non-covalent)
U10.5: 16 residues within 4Å:- Chain A: S.179, F.180, T.183, H.191, L.194, E.213, D.214, F.217, S.224, I.225, G.226, T.227, I.230, L.233, F.244
- Ligands: U10.8
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:F.180, A:L.194, A:F.217, A:F.217, A:I.225, A:I.230, A:I.230, A:L.233, A:F.244
- Hydrogen bonds: A:I.225, A:G.226
- pi-Stacking: A:F.217
U10.8: 10 residues within 4Å:- Chain 6: W.32, L.36
- Chain A: M.175, I.176, S.179, W.263, W.264
- Chain B: F.91
- Ligands: U10.5, BCL.7
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain 6- Hydrophobic interactions: A:M.175, A:I.176, A:W.264, 6:W.32, 6:W.32
- Hydrogen bonds: A:S.179
U10.12: 24 residues within 4Å:- Chain A: F.30, V.32, G.36, V.37, F.40, W.101
- Chain B: M.219, H.220, T.223, I.224, A.249, A.250, W.253, M.257, F.259, N.260, A.261, T.262, I.266, W.269, M.273
- Ligands: BCL.2, BPB.3, PC1.16
18 PLIP interactions:8 interactions with chain A, 10 interactions with chain B- Hydrophobic interactions: A:F.30, A:F.30, A:F.30, A:V.32, A:V.32, A:V.37, A:F.40, A:W.101, B:M.219, B:W.253, B:F.259, B:F.259, B:A.261, B:I.266, B:I.266, B:W.269
- Hydrogen bonds: B:H.220, B:A.261
U10.76: 11 residues within 4Å:- Chain 6: F.7, A.8, L.11, M.12, A.15, A.43, A.47, A.48, P.50
- Chain B: F.8, W.42
7 PLIP interactions:3 interactions with chain B, 4 interactions with chain 6- Hydrophobic interactions: B:F.8, 6:F.7, 6:L.11, 6:A.43
- pi-Stacking: B:W.42, B:W.42, 6:F.7
- 1 x FE2: FE (II) ION(Non-covalent)
- 26 x SPO: SPHEROIDENE(Non-covalent)
SPO.13: 21 residues within 4Å:- Chain B: W.67, F.68, I.71, G.72, F.75, W.76, F.106, S.120, F.121, M.123, F.124, W.158, L.161, G.162, F.163, V.176, Y.178, G.179, I.180
- Chain N: M.30
- Ligands: BCL.7
16 PLIP interactions:16 interactions with chain B- Hydrophobic interactions: B:W.67, B:F.68, B:F.68, B:I.71, B:I.71, B:F.75, B:F.106, B:F.124, B:W.158, B:L.161, B:F.163, B:V.176, B:V.176, B:Y.178, B:Y.178, B:I.180
SPO.23: 25 residues within 4Å:- Chain 3: F.4, K.6, M.9, I.10
- Chain D: F.17, Q.20, F.23, L.24, L.27, M.30, I.31
- Chain E: E.19, L.20, V.23, Y.24, G.27, L.28
- Chain F: F.25, V.29, H.32, L.33
- Ligands: BCL.21, BCL.24, SPO.26, SPO.73
17 PLIP interactions:6 interactions with chain D, 7 interactions with chain E, 2 interactions with chain 3, 2 interactions with chain F- Hydrophobic interactions: D:F.17, D:F.23, D:L.24, D:L.24, D:L.27, D:I.31, E:L.20, E:V.23, E:Y.24, E:Y.24, E:L.28, E:L.28, E:L.28, 3:F.4, 3:M.9, F:F.25, F:V.29
SPO.25: 26 residues within 4Å:- Chain D: K.6, I.7, I.10
- Chain E: D.6, L.7
- Chain F: F.17, Q.20, F.23, L.24, L.27, M.30
- Chain G: E.19, L.20, V.23, Y.24, G.27, L.28, F.31
- Chain H: F.25, A.28, H.32, L.33
- Ligands: BCL.24, SPO.26, BCL.28, BCL.30
23 PLIP interactions:8 interactions with chain G, 7 interactions with chain F, 2 interactions with chain H, 4 interactions with chain D, 2 interactions with chain E- Hydrophobic interactions: G:E.19, G:L.20, G:V.23, G:Y.24, G:Y.24, G:L.28, G:L.28, G:F.31, F:F.17, F:F.17, F:F.23, F:F.23, F:L.24, F:L.24, F:L.27, H:F.25, H:A.28, D:K.6, D:K.6, D:I.7, D:I.10, E:L.7, E:L.7
SPO.26: 14 residues within 4Å:- Chain E: F.49
- Chain F: F.17, Q.20, K.50
- Chain G: F.31, V.34, A.38, A.41, V.42
- Ligands: BCL.21, PC1.22, SPO.23, BCL.24, SPO.25
9 PLIP interactions:5 interactions with chain G, 2 interactions with chain F, 2 interactions with chain E- Hydrophobic interactions: G:F.31, G:V.34, G:A.38, G:A.41, G:V.42, F:F.17, E:F.49, E:F.49
- Hydrogen bonds: F:K.50
SPO.29: 11 residues within 4Å:- Chain G: F.49
- Chain H: F.17, Q.20, K.50
- Chain I: F.31, A.38, A.41, W.45
- Ligands: BCL.28, BCL.30, SPO.31
5 PLIP interactions:2 interactions with chain I, 2 interactions with chain G, 1 interactions with chain H- Hydrophobic interactions: I:A.38, I:A.41, G:F.49, G:F.49, H:F.17
SPO.31: 25 residues within 4Å:- Chain F: F.4, K.6, I.7, M.9, I.10
- Chain G: L.7
- Chain H: F.17, Q.20, F.23, L.24, L.27, M.30
- Chain I: L.20, V.23, Y.24, G.27, L.28
- Chain J: F.25, V.29, H.32, L.33
- Ligands: SPO.29, BCL.32, SPO.33, BCL.34
15 PLIP interactions:4 interactions with chain H, 2 interactions with chain J, 1 interactions with chain G, 6 interactions with chain I, 2 interactions with chain F- Hydrophobic interactions: H:F.17, H:F.23, H:L.24, H:L.27, J:F.25, J:V.29, G:L.7, I:L.20, I:V.23, I:Y.24, I:Y.24, I:L.28, I:L.28, F:F.4, F:K.6
SPO.33: 13 residues within 4Å:- Chain I: Y.43, F.49
- Chain J: F.17, Q.20, K.50
- Chain K: F.31, V.34, A.38, V.42
- Ligands: SPO.31, BCL.32, BCL.34, SPO.36
8 PLIP interactions:4 interactions with chain K, 1 interactions with chain J, 3 interactions with chain I- Hydrophobic interactions: K:F.31, K:V.34, K:A.38, K:V.42, I:F.49, I:F.49, I:F.49
- Hydrogen bonds: J:K.50
SPO.35: 21 residues within 4Å:- Chain J: F.4, K.6, I.7, I.10
- Chain L: F.17, Q.20, F.23, L.24, L.27
- Chain M: L.20, V.23, Y.24, G.27, L.28
- Chain N: A.28, H.32, L.36, W.43
- Ligands: SPO.38, BCL.40, BCL.42
16 PLIP interactions:3 interactions with chain N, 5 interactions with chain J, 4 interactions with chain M, 4 interactions with chain L- Hydrophobic interactions: N:A.28, N:L.36, N:W.43, J:F.4, J:K.6, J:K.6, J:I.10, J:I.10, M:L.20, M:V.23, M:Y.24, M:L.28, L:F.17, L:F.23, L:L.24, L:L.27
SPO.36: 22 residues within 4Å:- Chain H: K.6, I.7, I.10
- Chain I: L.7
- Chain J: F.17, Q.20, F.23, L.24, L.27
- Chain K: L.20, V.23, Y.24, G.27, L.28, F.31
- Chain L: A.28, H.32, L.33, L.36
- Ligands: SPO.33, BCL.37, BCL.39
18 PLIP interactions:6 interactions with chain K, 1 interactions with chain I, 5 interactions with chain J, 3 interactions with chain L, 3 interactions with chain H- Hydrophobic interactions: K:L.20, K:V.23, K:V.23, K:L.28, K:L.28, K:F.31, I:L.7, J:F.17, J:F.23, J:L.24, J:L.27, J:L.27, L:A.28, L:H.32, L:L.36, H:K.6, H:I.10, H:I.10
SPO.38: 12 residues within 4Å:- Chain K: F.49
- Chain L: F.17, Q.20, K.50
- Chain M: F.31, A.38, A.41, V.42, W.45
- Ligands: SPO.35, BCL.37, BCL.39
7 PLIP interactions:5 interactions with chain M, 1 interactions with chain K, 1 interactions with chain L- Hydrophobic interactions: M:F.31, M:A.38, M:A.41, M:V.42, M:W.45, K:F.49, L:F.17
SPO.41: 12 residues within 4Å:- Chain M: F.49
- Chain N: F.17, Q.20, K.50
- Chain O: F.31, V.34, A.38, A.41, V.42
- Ligands: BCL.40, BCL.42, SPO.43
8 PLIP interactions:3 interactions with chain M, 5 interactions with chain O- Hydrophobic interactions: M:F.49, M:F.49, M:F.49, O:F.31, O:V.34, O:A.38, O:A.41, O:V.42
SPO.43: 25 residues within 4Å:- Chain L: F.4, K.6, I.7, I.10
- Chain N: F.17, Q.20, L.24, L.27, M.30, I.31
- Chain O: E.19, L.20, V.23, Y.24, G.27, L.28
- Chain P: F.25, A.28, H.32, L.33, W.43
- Ligands: SPO.41, BCL.44, SPO.46, BCL.47
18 PLIP interactions:4 interactions with chain P, 5 interactions with chain O, 3 interactions with chain L, 6 interactions with chain N- Hydrophobic interactions: P:F.25, P:A.28, P:H.32, P:W.43, O:L.20, O:L.20, O:V.23, O:L.28, O:L.28, L:F.4, L:I.7, L:I.10, N:F.17, N:F.17, N:L.24, N:L.24, N:L.27, N:I.31
SPO.45: 23 residues within 4Å:- Chain N: K.6, I.7, M.9, I.10
- Chain P: F.17, Q.20, F.23, L.24, L.27, I.31
- Chain Q: E.19, L.20, V.23, Y.24, G.27, L.28
- Chain R: F.25, A.28, H.32, L.33
- Ligands: SPO.46, BCL.48, BCL.49
14 PLIP interactions:2 interactions with chain R, 4 interactions with chain P, 5 interactions with chain Q, 3 interactions with chain N- Hydrophobic interactions: R:F.25, R:A.28, P:F.17, P:F.23, P:L.24, P:I.31, Q:L.20, Q:V.23, Q:Y.24, Q:L.28, Q:L.28, N:K.6, N:K.6, N:I.10
SPO.46: 14 residues within 4Å:- Chain O: F.49
- Chain P: F.17, Q.20, K.50, Y.51
- Chain Q: V.34, A.38, A.41, V.42, W.45
- Ligands: SPO.43, BCL.44, SPO.45, BCL.47
10 PLIP interactions:5 interactions with chain Q, 5 interactions with chain O- Hydrophobic interactions: Q:V.34, Q:A.38, Q:A.41, Q:V.42, Q:W.45, O:F.49, O:F.49, O:F.49, O:F.49, O:F.49
SPO.51: 23 residues within 4Å:- Chain P: K.6, I.7, I.10
- Chain Q: L.7
- Chain R: F.17, Q.20, F.23, L.24, L.27, I.31
- Chain S: E.19, L.20, V.23, Y.24, G.27, L.28
- Chain T: F.25, H.32, L.33
- Ligands: BCL.50, SPO.52, BCL.53, SPO.56
17 PLIP interactions:6 interactions with chain R, 2 interactions with chain P, 7 interactions with chain S, 1 interactions with chain Q, 1 interactions with chain T- Hydrophobic interactions: R:F.17, R:F.23, R:L.24, R:L.24, R:L.27, R:I.31, P:K.6, P:I.7, S:E.19, S:L.20, S:V.23, S:Y.24, S:Y.24, S:L.28, S:L.28, Q:L.7, T:F.25
SPO.52: 12 residues within 4Å:- Chain Q: F.49
- Chain R: F.17, Q.20
- Chain S: F.31, V.34, A.38, A.41, V.42, W.45
- Ligands: BCL.48, BCL.49, SPO.51
9 PLIP interactions:1 interactions with chain R, 6 interactions with chain S, 2 interactions with chain Q- Hydrophobic interactions: R:Q.20, S:F.31, S:F.31, S:V.34, S:A.38, S:A.41, S:V.42, Q:F.49, Q:F.49
SPO.54: 27 residues within 4Å:- Chain R: K.6, I.7, I.10
- Chain S: L.7
- Chain T: F.17, Q.20, F.23, L.24, L.27, I.34
- Chain U: E.19, L.20, V.23, Y.24, G.27, L.28, F.31
- Chain V: F.25, A.28, V.29, H.32, L.33, L.36, W.43
- Ligands: BCL.55, SPO.56, BCL.59
21 PLIP interactions:4 interactions with chain R, 6 interactions with chain T, 1 interactions with chain S, 5 interactions with chain V, 5 interactions with chain U- Hydrophobic interactions: R:K.6, R:K.6, R:I.7, R:I.7, T:F.17, T:F.17, T:F.23, T:L.24, T:L.27, T:I.34, S:L.7, V:F.25, V:A.28, V:V.29, V:L.36, V:W.43, U:E.19, U:V.23, U:L.28, U:L.28, U:F.31
SPO.56: 12 residues within 4Å:- Chain S: F.49
- Chain T: F.17
- Chain U: F.31, V.34, A.38, A.41, V.42, W.45
- Ligands: BCL.50, SPO.51, BCL.53, SPO.54
8 PLIP interactions:7 interactions with chain U, 1 interactions with chain S- Hydrophobic interactions: U:F.31, U:V.34, U:A.38, U:A.41, U:V.42, U:W.45, U:W.45, S:F.49
SPO.57: 11 residues within 4Å:- Chain U: Y.43, F.49
- Chain V: F.17, Q.20
- Chain W: V.34, A.38, A.41, W.45
- Ligands: BCL.55, BCL.59, SPO.60
7 PLIP interactions:2 interactions with chain U, 3 interactions with chain W, 2 interactions with chain V- Hydrophobic interactions: U:F.49, U:F.49, W:V.34, W:A.38, W:A.41, V:F.17, V:Q.20
SPO.60: 27 residues within 4Å:- Chain T: F.4, K.6, I.7, I.10
- Chain V: F.17, Q.20, F.23, L.24, L.27, M.30, I.34
- Chain W: E.19, L.20, V.23, Y.24, G.27, L.28, F.31
- Chain X: F.25, A.28, V.29, H.32, L.36
- Ligands: SPO.57, BCL.59, BCL.61, BCL.62
22 PLIP interactions:4 interactions with chain X, 3 interactions with chain T, 6 interactions with chain V, 9 interactions with chain W- Hydrophobic interactions: X:F.25, X:A.28, X:V.29, X:H.32, T:F.4, T:F.4, T:K.6, V:F.17, V:F.23, V:L.24, V:L.27, V:L.27, V:I.34, W:L.20, W:L.20, W:V.23, W:V.23, W:Y.24, W:L.28, W:L.28, W:L.28, W:F.31
SPO.63: 25 residues within 4Å:- Chain V: F.4, K.6, I.10
- Chain W: L.7
- Chain X: F.17, Q.20, F.23, L.24, L.27, M.30, I.31, I.34
- Chain Y: E.19, L.20, V.23, Y.24, G.27, L.28
- Chain Z: F.25, V.29, H.32, L.33
- Ligands: BCL.64, SPO.65, BCL.66
21 PLIP interactions:4 interactions with chain V, 6 interactions with chain X, 8 interactions with chain Y, 1 interactions with chain W, 2 interactions with chain Z- Hydrophobic interactions: V:F.4, V:K.6, V:K.6, V:I.10, X:F.17, X:F.23, X:L.24, X:L.24, X:L.27, X:I.31, Y:E.19, Y:L.20, Y:V.23, Y:V.23, Y:Y.24, Y:L.28, Y:L.28, Y:L.28, W:L.7, Z:F.25, Z:V.29
SPO.65: 11 residues within 4Å:- Chain W: F.49
- Chain X: F.17, Q.20
- Chain Y: F.31, V.34, A.41, V.42, W.45
- Ligands: BCL.61, BCL.62, SPO.63
7 PLIP interactions:4 interactions with chain Y, 2 interactions with chain W, 1 interactions with chain X- Hydrophobic interactions: Y:F.31, Y:V.34, Y:A.41, Y:W.45, W:F.49, W:F.49, X:F.17
SPO.70: 14 residues within 4Å:- Chain 2: F.49
- Chain 3: F.17, Q.20
- Chain 4: F.31, V.34, A.38, A.41, V.42, I.44, W.45
- Ligands: BCL.68, BCL.71, SPO.72, SPO.75
6 PLIP interactions:1 interactions with chain 3, 5 interactions with chain 4- Hydrophobic interactions: 3:F.17, 4:F.31, 4:A.38, 4:A.41, 4:V.42, 4:W.45
SPO.72: 22 residues within 4Å:- Chain 1: K.6, I.10
- Chain 2: L.7
- Chain 3: F.17, Q.20, F.23, L.24, L.27, M.30, I.31
- Chain 4: L.20, V.23, Y.24, G.27, L.28
- Chain D: F.25, A.28, H.32, L.33
- Ligands: BCL.19, SPO.70, BCL.74
18 PLIP interactions:7 interactions with chain 3, 1 interactions with chain 2, 6 interactions with chain 4, 2 interactions with chain 1, 2 interactions with chain D- Hydrophobic interactions: 3:F.17, 3:F.23, 3:F.23, 3:L.24, 3:L.24, 3:L.27, 3:I.31, 2:L.7, 4:L.20, 4:V.23, 4:Y.24, 4:Y.24, 4:L.28, 4:L.28, 1:K.6, 1:I.10, D:F.25, D:A.28
SPO.73: 12 residues within 4Å:- Chain 4: F.49
- Chain D: F.17, Q.20
- Chain E: V.34, A.38, A.41, V.42, W.45
- Ligands: BCL.19, PC1.20, SPO.23, BCL.74
6 PLIP interactions:4 interactions with chain E, 2 interactions with chain 4- Hydrophobic interactions: E:V.34, E:A.38, E:A.41, E:V.42, 4:F.49, 4:F.49
SPO.75: 23 residues within 4Å:- Chain 1: Q.20, L.24, L.27, M.30, I.31
- Chain 2: V.23, Y.24, G.27, L.28, L.30, F.31
- Chain 3: F.25, A.28, H.32, L.33
- Chain 5: R.20, V.23, A.24, M.27
- Ligands: BCL.68, BCL.69, SPO.70, BCL.71
15 PLIP interactions:5 interactions with chain 2, 5 interactions with chain 1, 3 interactions with chain 3, 2 interactions with chain 5- Hydrophobic interactions: 2:Y.24, 2:Y.24, 2:L.28, 2:L.30, 2:F.31, 1:L.24, 1:L.24, 1:L.27, 1:L.27, 1:I.31, 3:F.25, 3:A.28, 3:H.32, 5:R.20, 5:V.23
- 2 x CDL: CARDIOLIPIN(Non-covalent)
CDL.14: 21 residues within 4Å:- Chain A: N.200, P.201
- Chain B: G.144, K.145, H.146, W.149, S.153, W.156, R.268, W.272, L.279, I.283
- Chain C: A.16, S.19, F.20, I.22, F.23, G.26, L.27, Y.30
- Chain J: L.26
22 PLIP interactions:13 interactions with chain B, 7 interactions with chain C, 1 interactions with chain J, 1 interactions with chain A- Hydrophobic interactions: B:W.149, B:W.149, B:W.156, B:W.156, B:W.156, B:W.272, B:L.279, B:I.283, C:A.16, C:I.22, C:F.23, C:F.23, C:L.27, C:Y.30, J:L.26
- Hydrogen bonds: B:K.145, C:Y.30, A:N.200
- Salt bridges: B:H.146, B:H.146, B:H.146, B:R.268
CDL.18: 19 residues within 4Å:- Chain C: F.7, G.8, N.9, F.10, Y.18, I.22, A.25, G.26
- Chain F: V.29, M.30, L.33, S.37
- Chain H: V.22, L.33, L.36, S.37, N.42
- Ligands: PC1.4, PC1.15
16 PLIP interactions:1 interactions with chain B, 10 interactions with chain C, 3 interactions with chain H, 2 interactions with chain F- Hydrogen bonds: B:N.301, C:N.9, C:N.9, C:Y.18, H:S.37, H:N.42
- Hydrophobic interactions: C:F.7, C:F.10, C:Y.18, C:Y.18, C:I.22, C:I.22, C:A.25, H:V.22, F:V.29, F:L.33
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cao, P. et al., Structural basis for the assembly and quinone transport mechanisms of the dimeric photosynthetic RC-LH1 supercomplex. Nat Commun (2022)
- Release Date
- 2022-06-01
- Peptides
- Reaction center protein L chain: A
Reaction center protein M chain: B
Reaction center protein H chain: C
Light-harvesting protein B-875 alpha chain: DFHJLNPRTVXZ13
Light-harvesting protein B-875 beta chain: EGIKMOQSUWY024
Intrinsic membrane protein PufX: 5
Rsp_7571 Protein-Y PufY: 6 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
LB
MC
HD
AF
DH
FJ
IL
KN
OP
QR
ST
UV
WX
3Z
11
73
9E
BG
EI
GK
JM
NO
PQ
RS
TU
VW
CY
Z0
22
84
05
X6
Y - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 7vny.1
Rba sphaeroides WT RC-LH1 monomer
Reaction center protein L chain
Reaction center protein M chain
Reaction center protein H chain
Light-harvesting protein B-875 alpha chain
Toggle Identical (DFHJLNPRTVX3)Light-harvesting protein B-875 beta chain
Toggle Identical (24) Toggle Identical (GIKMOQSUW)Intrinsic membrane protein PufX
Rsp_7571 Protein-Y PufY
Related Entries With Identical Sequence
1e14.1 | 1e6d.1 | 1f6n.1 | 1fnp.1 | 1fnq.1 | 1jgw.1 | 1jgx.1 | 1jgy.1 | 1jgz.1 | 1jh0.1 | 1k6l.1 | 1k6n.1 | 1kby.1 | 1l9b.1 | 1l9j.1 | 1l9j.2 | 1m3x.1 | 1mps.1 | 1pcr.1 | 1qov.1 | 1rg5.1 | 1rgn.1 | 1rqk.1 | 1ry5.1 | 1rzh.1 | 1rzz.1 | 1rzz.2 | 1s00.1 | 1s00.2 | 1umx.1 more...less...1yf6.1 | 1yst.1 | 1z9j.1 | 1z9k.1 | 1z9k.2 | 2bnp.1 | 2bns.1 | 2boz.1 | 2gmr.1 | 2hg3.1 | 2hg9.1 | 2hh1.1 | 2hhk.1 | 2hit.1 | 2hj6.1 | 2j8c.1 | 2j8d.1 | 2jiy.1 | 2jj0.1 | 2nrg.1 | 2rcr.1 | 2uws.1 | 2uwt.1 | 2uwu.1 | 2uwv.1 | 2uww.1 | 2ux3.1 | 2ux4.1 | 2ux5.1 | 2uxj.1 | 2uxk.1 | 2uxl.1 | 2uxm.1 | 2wx5.1 | 3dsy.1 | 3dta.1 | 3dtr.1 | 3dts.1 | 3du2.1 | 3du3.1 | 3duq.1 | 3i4d.1 | 3zum.1 | 3zuw.1 | 4h99.1 | 4h9l.1 | 4hbh.1 | 4hbj.1 | 4in5.1 | 4in7.1 | 4lwy.1 | 4rcr.1 | 4v9g.1 | 4v9g.2 | 4v9g.3 | 4v9g.4 | 4v9g.5 | 4v9g.6 | 4v9g.7 | 4v9g.8 | 4v9g.9 | 4v9g.10 | 4v9g.11 | 4v9g.12 | 4v9g.13 | 4v9g.14 | 4v9g.15 | 4v9g.16 | 4v9g.17 | 4v9g.18 | 4v9g.19 | 4v9g.20 | 4v9g.21 | 4v9g.22 | 4v9g.23 | 4v9g.24 | 4v9g.25 | 4v9g.26 | 4v9g.27 | 4v9g.28 | 4v9g.29 | 4v9g.30 | 4v9g.31 | 4v9g.32 | 4v9g.33 | 4v9g.34 | 4v9g.35 | 4v9g.36 | 4v9g.37 | 4v9g.38 | 4v9g.39 | 4v9g.40 | 4v9g.41 | 4v9g.42 | 4v9g.43 | 4v9g.44 | 4v9g.45 | 4v9g.46 | 4v9g.47 | 4v9g.48 | 4v9g.49 | 4v9g.50 | 4v9g.51 | 4v9g.52 | 4v9g.53 | 4v9g.54 | 4v9g.55 | 4v9g.56 | 4v9g.57 | 4v9g.58 | 4v9g.59 | 4v9g.60 | 4v9g.61 | 4v9g.62 | 4v9g.63 | 4v9g.64 | 5lri.1 | 5lse.1 | 7f0l.1 | 7mh3.1 | 7mh4.1 | 7mh5.1 | 7mh8.1 | 7mh9.1 | 7mha.1 | 7pqd.1 | 7pqd.2 | 7pqd.3 | 7pqd.4 | 7pqd.5 | 7pqd.6 | 7pqd.7 | 7pqd.8 | 7pqd.9 | 7pqd.10 | 7pqd.11 | 7pqd.12 | 7pqd.13 | 7pqd.14 | 7pqd.15 | 7pqd.16 | 7pqd.17 | 7pqd.18 | 7pqd.19 | 7pqd.20 | 7pqd.21 | 7pqd.22 | 7pqd.23 | 7pqd.24 | 7pqd.25 | 7pqd.26 | 7pqd.27 | 7pqd.28 | 7pqd.36 | 7pqd.37 | 7pqd.38 | 7pqd.39 | 7pqd.40 | 7pqd.41 | 7pqd.42 | 7pqd.43 | 7pqd.44 | 7pqd.45 | 7pqd.46 | 7pqd.47 | 7pqd.48 | 7pqd.49 | 7pqd.50 | 7pqd.51 | 7pqd.52 | 7pqd.53 | 7pqd.54 | 7pqd.55 | 7pqd.56 | 7pqd.57 | 7pqd.58 | 7pqd.59 | 7pqd.60 | 7pqd.61 | 7pqd.62 | 7pqd.63 | 7va9.1 | 7va9.2 | 7va9.3 | 7va9.4 | 7va9.5 | 7va9.6 | 7va9.7 | 7va9.8 | 7va9.9 | 7va9.10 | 7va9.11 | 7va9.12 | 7va9.13 | 7va9.14 | 7va9.15 | 7va9.16 | 7va9.17 | 7va9.18 | 7va9.19 | 7va9.20 | 7va9.21 | 7va9.22 | 7va9.23 | 7va9.24 | 7va9.25 | 7va9.26 | 7va9.27 | 7va9.28 | 7va9.29 | 7va9.30 | 7va9.31 | 7va9.32 | 7va9.33 | 7va9.34 | 7va9.35 | 7va9.36 | 7va9.37 | 7va9.38 | 7va9.39 | 7va9.40 | 7va9.41 | 7va9.42 | 7va9.43 | 7va9.44 | 7va9.45 | 7va9.46 | 7va9.47 | 7va9.48 | 7va9.49 | 7va9.50 | 7va9.51 | 7va9.52 | 7va9.53 | 7va9.54 | 7va9.55 | 7va9.56 | 7va9.57 | 7va9.58 | 7va9.59 | 7va9.60 | 7va9.61 | 7va9.62 | 7va9.63 | 7va9.64 | 7vb9.1 | 7vnm.1 | 7vor.1 | 7vor.2 | 7vor.3 | 7vor.4 | 7vor.5 | 7vor.6 | 7vor.7 | 7vor.8 | 7vor.9 | 7vor.10 | 7vor.11 | 7vor.12 | 7vor.13 | 7vor.14 | 7vor.15 | 7vor.16 | 7vor.17 | 7vor.18 | 7vor.19 | 7vor.20 | 7vor.21 | 7vor.22 | 7vor.23 | 7vor.24 | 7vor.25 | 7vor.26 | 7vor.27 | 7vor.28 | 7vor.29 | 7vor.30 | 7vor.31 | 7vor.32 | 7vor.33 | 7vor.34 | 7vor.35 | 7vor.36 | 7vor.37 | 7vor.38 | 7vor.39 | 7vor.40 | 7vor.41 | 7vor.42 | 7vor.43 | 7vor.44 | 7vor.45 | 7vor.46 | 7vor.47 | 7vor.48 | 7vor.49 | 7vor.50 | 7vor.51 | 7vor.52 | 7vor.53 | 7vor.54 | 7vor.55 | 7vor.56 | 7vor.57 | 7vor.58 | 7vor.59 | 7vor.60 | 7vor.61 | 7vor.62 | 7vor.63 | 7vor.64 | 7vor.65 | 7vor.66 | 7vot.1 | 7vot.2 | 7vot.3 | 7vot.4 | 7vot.5 | 7vot.6 | 7vot.7 | 7vot.8 | 7vot.9 | 7vot.10 | 7vot.11 | 7vot.12 | 7vot.13 | 7vot.14 | 7vot.15 | 7vot.16 | 7vot.17 | 7vot.18 | 7vot.19 | 7vot.20 | 7vot.21 | 7vot.22 | 7vot.23 | 7vot.24 | 7vot.25 | 7vot.26 | 7vot.27 | 7vot.28 | 7vot.29 | 7vot.30 | 7vot.31 | 7vot.32 | 7vot.33 | 7vot.34 | 7vot.35 | 7vot.36 | 7vot.37 | 7vot.38 | 7vot.39 | 7vot.40 | 7vot.41 | 7vot.42 | 7vot.43 | 7vot.44 | 7vot.45 | 7vot.46 | 7vot.47 | 7vot.48 | 7vot.49 | 7vot.50 | 7vot.51 | 7vot.52 | 7vot.53 | 7vot.54 | 7vot.55 | 7vot.56 | 7vot.57 | 7vot.58 | 7vot.59 | 7vot.60 | 7vot.61 | 7vot.62 | 7vot.63 | 7vot.64 | 7vot.65 | 7vot.66 | 7voy.1 | 7vy2.33 | 8vtj.1