- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-17-17-1-1-1-mer
- Ligands
- 38 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)
BCL.1: 13 residues within 4Å:- Chain 0: I.31
- Chain A: A.28, H.32, W.43
- Chain B: F.31, V.34, A.35, A.38, H.39, V.42, W.45
- Ligands: BCL.2, BCL.28
8 PLIP interactions:3 interactions with chain B, 4 interactions with chain A, 1 interactions with chain 0,- Hydrophobic interactions: B:A.38, B:V.42, B:W.45, A:A.28, A:W.43, A:W.43, A:W.43, 0:I.31
BCL.2: 14 residues within 4Å:- Chain A: L.24, A.28, I.31, H.32, L.35, Y.41
- Chain B: F.31, A.35, H.39, W.48, F.49
- Chain C: W.43
- Ligands: BCL.1, BCL.3
9 PLIP interactions:7 interactions with chain B, 2 interactions with chain A,- Hydrophobic interactions: B:F.31, B:A.35, B:W.48, B:W.48, B:W.48, A:I.31, A:Y.41
- pi-Cation interactions: B:H.39
- Metal complexes: B:H.39
BCL.3: 12 residues within 4Å:- Chain A: I.31
- Chain C: H.32, W.43
- Chain D: F.31, V.34, A.35, A.38, H.39, V.42, W.45
- Ligands: BCL.2, BCL.4
6 PLIP interactions:2 interactions with chain D, 3 interactions with chain C, 1 interactions with chain A,- Hydrophobic interactions: D:A.38, D:W.45, C:W.43, C:W.43, C:W.43, A:I.31
BCL.4: 15 residues within 4Å:- Chain C: L.24, L.27, A.28, I.31, H.32, L.35, Y.41
- Chain D: F.31, A.35, H.39, W.48, F.49
- Chain E: W.43
- Ligands: BCL.3, BCL.5
9 PLIP interactions:7 interactions with chain D, 2 interactions with chain C,- Hydrophobic interactions: D:F.31, D:A.35, D:W.48, D:W.48, D:W.48, C:I.31, C:Y.41
- pi-Cation interactions: D:H.39
- Metal complexes: D:H.39
BCL.5: 12 residues within 4Å:- Chain E: F.25, A.28, H.32, L.35, W.43
- Chain F: F.31, V.34, A.35, A.38, H.39
- Ligands: BCL.4, BCL.6
6 PLIP interactions:5 interactions with chain E, 1 interactions with chain F,- Hydrophobic interactions: E:L.35, E:W.43, E:W.43, E:W.43, E:W.43, F:A.38
BCL.6: 15 residues within 4Å:- Chain E: L.24, L.27, A.28, I.31, H.32, L.35, Y.41
- Chain F: F.31, A.35, H.39, W.48, F.49
- Chain G: W.43
- Ligands: BCL.5, BCL.7
10 PLIP interactions:3 interactions with chain E, 7 interactions with chain F,- Hydrophobic interactions: E:I.31, E:L.35, E:Y.41, F:F.31, F:A.35, F:W.48, F:W.48, F:W.48
- pi-Cation interactions: F:H.39
- Metal complexes: F:H.39
BCL.7: 13 residues within 4Å:- Chain E: I.31
- Chain G: A.28, H.32, L.35, W.43
- Chain H: F.31, V.34, A.35, A.38, H.39, V.42
- Ligands: BCL.6, BCL.8
5 PLIP interactions:3 interactions with chain G, 1 interactions with chain E, 1 interactions with chain H,- Hydrophobic interactions: G:L.35, G:W.43, G:W.43, E:I.31, H:A.38
BCL.8: 15 residues within 4Å:- Chain G: L.24, A.28, I.31, H.32, L.35, Y.41
- Chain H: F.31, A.35, H.39, W.48, F.49
- Chain I: W.43, L.44
- Ligands: BCL.7, BCL.9
11 PLIP interactions:7 interactions with chain H, 3 interactions with chain G, 1 interactions with chain I,- Hydrophobic interactions: H:F.31, H:A.35, H:W.48, H:W.48, H:W.48, G:I.31, G:L.35, G:Y.41, I:L.44
- pi-Cation interactions: H:H.39
- Metal complexes: H:H.39
BCL.9: 11 residues within 4Å:- Chain I: A.28, H.32, W.43
- Chain J: F.31, V.34, A.35, A.38, H.39, V.42
- Ligands: BCL.8, BCL.10
5 PLIP interactions:3 interactions with chain I, 2 interactions with chain J,- Hydrophobic interactions: I:W.43, I:W.43, J:A.38, J:V.42
- pi-Stacking: I:W.43
BCL.10: 15 residues within 4Å:- Chain I: L.24, L.27, A.28, I.31, H.32, L.35, Y.41
- Chain J: F.31, A.35, H.39, W.48, F.49
- Chain K: W.43
- Ligands: BCL.9, BCL.11
9 PLIP interactions:2 interactions with chain I, 7 interactions with chain J,- Hydrophobic interactions: I:I.31, I:Y.41, J:F.31, J:A.35, J:W.48, J:W.48, J:W.48
- pi-Cation interactions: J:H.39
- Metal complexes: J:H.39
BCL.11: 15 residues within 4Å:- Chain I: I.31
- Chain K: L.24, F.25, A.28, H.32, W.43
- Chain L: F.31, V.34, A.35, A.38, H.39, V.42, W.45
- Ligands: BCL.10, BCL.12
6 PLIP interactions:1 interactions with chain I, 3 interactions with chain K, 2 interactions with chain L,- Hydrophobic interactions: I:I.31, K:W.43, K:W.43, K:W.43, L:A.38, L:W.45
BCL.12: 15 residues within 4Å:- Chain K: L.24, L.27, A.28, I.31, H.32, L.35, Y.41
- Chain L: F.31, A.35, H.39, W.48, F.49
- Chain M: W.43
- Ligands: BCL.11, BCL.13
11 PLIP interactions:4 interactions with chain K, 7 interactions with chain L,- Hydrophobic interactions: K:I.31, K:L.35, K:L.35, K:Y.41, L:F.31, L:A.35, L:W.48, L:W.48, L:W.48
- pi-Cation interactions: L:H.39
- Metal complexes: L:H.39
BCL.13: 13 residues within 4Å:- Chain K: I.31
- Chain L: F.49
- Chain M: A.28, H.32, W.43
- Chain N: F.31, V.34, A.35, A.38, H.39, W.45
- Ligands: BCL.12, BCL.14
7 PLIP interactions:2 interactions with chain M, 2 interactions with chain N, 1 interactions with chain L, 2 interactions with chain K,- Hydrophobic interactions: M:W.43, M:W.43, N:A.38, N:W.45, L:F.49, K:I.31, K:I.31
BCL.14: 14 residues within 4Å:- Chain M: L.24, A.28, I.31, H.32, L.35, Y.41
- Chain N: F.31, A.35, H.39, W.48, F.49
- Chain O: W.43
- Ligands: BCL.13, BCL.15
11 PLIP interactions:4 interactions with chain M, 7 interactions with chain N,- Hydrophobic interactions: M:I.31, M:L.35, M:L.35, M:Y.41, N:F.31, N:A.35, N:W.48, N:W.48, N:W.48
- pi-Cation interactions: N:H.39
- Metal complexes: N:H.39
BCL.15: 13 residues within 4Å:- Chain M: I.31
- Chain O: A.28, H.32, L.35, W.43
- Chain P: F.31, V.34, A.35, A.38, H.39, W.45
- Ligands: BCL.14, BCL.16
9 PLIP interactions:2 interactions with chain M, 2 interactions with chain P, 5 interactions with chain O,- Hydrophobic interactions: M:I.31, M:I.31, P:A.38, P:W.45, O:L.35, O:W.43, O:W.43, O:W.43
- Metal complexes: O:H.32
BCL.16: 14 residues within 4Å:- Chain O: L.24, A.28, I.31, H.32, L.35, Y.41
- Chain P: F.31, A.35, H.39, W.48, F.49
- Chain Q: W.43
- Ligands: BCL.15, BCL.17
11 PLIP interactions:4 interactions with chain O, 7 interactions with chain P,- Hydrophobic interactions: O:I.31, O:L.35, O:L.35, O:Y.41, P:F.31, P:A.35, P:W.48, P:W.48, P:W.48
- pi-Cation interactions: P:H.39
- Metal complexes: P:H.39
BCL.17: 14 residues within 4Å:- Chain O: I.31
- Chain P: F.49
- Chain Q: A.28, H.32, W.43
- Chain R: F.31, V.34, A.35, A.38, H.39, V.42, W.45
- Ligands: BCL.16, BCL.18
8 PLIP interactions:3 interactions with chain R, 2 interactions with chain Q, 1 interactions with chain P, 2 interactions with chain O,- Hydrophobic interactions: R:A.38, R:V.42, R:W.45, Q:W.43, Q:W.43, P:F.49, O:I.31, O:I.31
BCL.18: 15 residues within 4Å:- Chain Q: L.24, L.27, A.28, I.31, H.32, L.35, Y.41
- Chain R: F.31, A.35, H.39, W.48, F.49
- Chain S: W.43
- Ligands: BCL.17, BCL.19
11 PLIP interactions:4 interactions with chain Q, 7 interactions with chain R,- Hydrophobic interactions: Q:I.31, Q:L.35, Q:Y.41, R:F.31, R:A.35, R:W.48, R:W.48, R:W.48
- Hydrogen bonds: Q:H.32
- pi-Cation interactions: R:H.39
- Metal complexes: R:H.39
BCL.19: 12 residues within 4Å:- Chain Q: I.31
- Chain S: H.32, W.43
- Chain T: F.31, V.34, A.35, A.38, H.39, V.42, W.45
- Ligands: BCL.18, BCL.20
8 PLIP interactions:2 interactions with chain T, 2 interactions with chain Q, 4 interactions with chain S,- Hydrophobic interactions: T:A.38, T:W.45, Q:I.31, Q:I.31, S:W.43, S:W.43, S:W.43, S:W.43
BCL.20: 14 residues within 4Å:- Chain S: L.24, A.28, I.31, H.32, L.35, Y.41
- Chain T: F.31, A.35, H.39, W.48, F.49
- Chain U: W.43
- Ligands: BCL.19, BCL.21
11 PLIP interactions:7 interactions with chain T, 4 interactions with chain S,- Hydrophobic interactions: T:F.31, T:A.35, T:W.48, T:W.48, T:W.48, S:I.31, S:L.35, S:Y.41
- pi-Cation interactions: T:H.39
- Metal complexes: T:H.39
- Hydrogen bonds: S:H.32
BCL.21: 13 residues within 4Å:- Chain T: F.49
- Chain U: A.28, H.32, W.43
- Chain V: F.31, V.34, A.35, A.38, H.39, V.42, W.45
- Ligands: BCL.20, BCL.22
6 PLIP interactions:2 interactions with chain V, 3 interactions with chain U, 1 interactions with chain T,- Hydrophobic interactions: V:A.38, V:W.45, U:W.43, U:W.43, U:W.43, T:F.49
BCL.22: 15 residues within 4Å:- Chain U: L.24, L.27, A.28, I.31, H.32, L.35, Y.41
- Chain V: F.31, A.35, H.39, W.48, F.49
- Chain W: W.43
- Ligands: BCL.21, BCL.23
10 PLIP interactions:3 interactions with chain U, 7 interactions with chain V,- Hydrophobic interactions: U:I.31, U:L.35, U:Y.41, V:F.31, V:A.35, V:W.48, V:W.48, V:W.48
- pi-Cation interactions: V:H.39
- Metal complexes: V:H.39
BCL.23: 14 residues within 4Å:- Chain U: I.31
- Chain W: A.28, H.32, L.35, W.43
- Chain X: F.31, V.34, A.35, A.38, H.39, V.42, W.45
- Ligands: BCL.22, BCL.24
7 PLIP interactions:4 interactions with chain W, 3 interactions with chain X,- Hydrophobic interactions: W:L.35, W:W.43, W:W.43, X:A.38, X:V.42, X:W.45
- Metal complexes: W:H.32
BCL.24: 12 residues within 4Å:- Chain 6: W.43
- Chain W: A.28, I.31, H.32, L.35
- Chain X: F.31, A.35, H.39, W.48, F.49
- Ligands: BCL.23, BCL.33
9 PLIP interactions:7 interactions with chain X, 2 interactions with chain W,- Hydrophobic interactions: X:F.31, X:A.35, X:W.48, X:W.48, X:W.48, W:I.31, W:L.35
- pi-Cation interactions: X:H.39
- Metal complexes: X:H.39
BCL.25: 11 residues within 4Å:- Chain Y: A.28, H.32, W.43
- Chain Z: F.31, V.34, A.35, A.38, H.39, V.42
- Ligands: BCL.26, BCL.30
5 PLIP interactions:3 interactions with chain Z, 2 interactions with chain Y,- Hydrophobic interactions: Z:A.38, Z:V.42, Z:V.42, Y:W.43, Y:W.43
BCL.26: 15 residues within 4Å:- Chain 0: W.43
- Chain Y: L.24, L.27, A.28, I.31, H.32, L.35, Y.41
- Chain Z: F.31, A.35, H.39, W.48, F.49
- Ligands: BCL.25, BCL.27
10 PLIP interactions:7 interactions with chain Z, 3 interactions with chain Y,- Hydrophobic interactions: Z:F.31, Z:A.35, Z:W.48, Z:W.48, Z:W.48, Y:I.31, Y:I.31, Y:Y.41
- pi-Cation interactions: Z:H.39
- Metal complexes: Z:H.39
BCL.27: 12 residues within 4Å:- Chain 0: A.28, H.32, W.43
- Chain 1: F.31, V.34, A.35, A.38, H.39, V.42
- Chain Y: I.31
- Ligands: BCL.26, BCL.28
7 PLIP interactions:4 interactions with chain 0, 2 interactions with chain 1, 1 interactions with chain Y,- Hydrophobic interactions: 0:W.43, 0:W.43, 0:W.43, 0:W.43, 1:A.38, 1:V.42, Y:I.31
BCL.28: 14 residues within 4Å:- Chain 0: L.24, A.28, I.31, H.32, L.35, Y.41
- Chain 1: F.31, A.35, H.39, W.48, F.49
- Chain A: W.43
- Ligands: BCL.1, BCL.27
10 PLIP interactions:3 interactions with chain 0, 7 interactions with chain 1,- Hydrophobic interactions: 0:I.31, 0:L.35, 0:Y.41, 1:F.31, 1:A.35, 1:W.48, 1:W.48, 1:W.48
- pi-Cation interactions: 1:H.39
- Metal complexes: 1:H.39
BCL.29: 10 residues within 4Å:- Chain 2: A.28, H.32, W.43
- Chain 3: F.31, V.34, A.35, A.38, H.39
- Ligands: BCL.30, BCL.32
5 PLIP interactions:4 interactions with chain 2, 1 interactions with chain 3,- Hydrophobic interactions: 2:W.43, 2:W.43, 2:W.43, 2:W.43, 3:A.38
BCL.30: 15 residues within 4Å:- Chain 2: L.24, A.28, I.31, H.32, L.35, Y.41
- Chain 3: F.31, A.35, H.39, W.48, F.49
- Chain Y: W.43, L.44
- Ligands: BCL.25, BCL.29
10 PLIP interactions:7 interactions with chain 3, 2 interactions with chain 2, 1 interactions with chain Y,- Hydrophobic interactions: 3:F.31, 3:A.35, 3:W.48, 3:W.48, 3:W.48, 2:I.31, 2:Y.41, Y:L.44
- pi-Cation interactions: 3:H.39
- Metal complexes: 3:H.39
BCL.31: 10 residues within 4Å:- Chain 4: A.28, H.32, W.43
- Chain 5: F.31, A.38, H.39, V.42, W.45
- Ligands: BCL.32, BCL.34
4 PLIP interactions:2 interactions with chain 5, 2 interactions with chain 4,- Hydrophobic interactions: 5:A.38, 5:W.45, 4:W.43, 4:W.43
BCL.32: 14 residues within 4Å:- Chain 2: W.43
- Chain 4: L.24, A.28, I.31, H.32, L.35, Y.41
- Chain 5: F.31, A.35, H.39, W.48, F.49
- Ligands: BCL.29, BCL.31
10 PLIP interactions:7 interactions with chain 5, 3 interactions with chain 4,- Hydrophobic interactions: 5:F.31, 5:A.35, 5:W.48, 5:W.48, 5:W.48, 4:I.31, 4:L.35, 4:Y.41
- pi-Cation interactions: 5:H.39
- Metal complexes: 5:H.39
BCL.33: 12 residues within 4Å:- Chain 6: A.28, H.32, W.43
- Chain 7: F.31, V.34, A.35, A.38, H.39, V.42, W.45
- Ligands: BCL.24, BCL.34
7 PLIP interactions:3 interactions with chain 7, 4 interactions with chain 6,- Hydrophobic interactions: 7:A.38, 7:V.42, 7:W.45, 6:W.43, 6:W.43, 6:W.43, 6:W.43
BCL.34: 13 residues within 4Å:- Chain 4: W.43
- Chain 6: L.24, A.28, I.31, H.32, Y.41
- Chain 7: F.31, A.35, H.39, W.48, F.49
- Ligands: BCL.31, BCL.33
9 PLIP interactions:2 interactions with chain 6, 7 interactions with chain 7,- Hydrophobic interactions: 6:I.31, 6:Y.41, 7:F.31, 7:A.35, 7:W.48, 7:W.48, 7:W.48
- pi-Cation interactions: 7:H.39
- Metal complexes: 7:H.39
BCL.35: 17 residues within 4Å:- Chain 8: L.132, L.155, T.161, Y.163, F.168, H.169, H.174, A.177, I.178, F.181, F.182, V.242, S.245
- Chain 9: L.210, Y.211
- Ligands: BCL.40, BCL.41
11 PLIP interactions:9 interactions with chain 8, 2 interactions with chain 9,- Hydrophobic interactions: 8:T.161, 8:Y.163, 8:F.168, 8:F.168, 8:A.177, 8:I.178, 9:L.210
- Hydrogen bonds: 8:S.245, 9:Y.211
- pi-Stacking: 8:H.174
- Metal complexes: 8:H.174
BCL.38: 9 residues within 4Å:- Chain 8: Y.129, F.147, Y.149, L.155
- Chain 9: G.204, I.207, A.208, Y.211
- Ligands: BPH.36
7 PLIP interactions:4 interactions with chain 8, 3 interactions with chain 9,- Hydrophobic interactions: 8:Y.129, 8:F.147, 8:Y.149, 8:L.155, 9:I.207, 9:A.208, 9:Y.211
BCL.40: 12 residues within 4Å:- Chain 8: H.169, M.175, I.178, F.182
- Chain 9: W.158, H.183, L.184, T.187
- Ligands: BCL.35, BCL.41, BPH.42, SPN.44
5 PLIP interactions:3 interactions with chain 8, 2 interactions with chain 9,- Hydrophobic interactions: 8:H.169, 8:I.178, 8:F.182, 9:L.184
- pi-Stacking: 9:H.183
BCL.41: 16 residues within 4Å:- Chain 9: L.157, T.187, N.188, F.190, S.191, L.197, F.198, H.203, S.206, I.207, V.277, T.278, G.281, I.285
- Ligands: BCL.35, BCL.40
5 PLIP interactions:5 interactions with chain 9,- Hydrophobic interactions: 9:F.190, 9:F.198, 9:V.277
- Salt bridges: 9:H.203
- pi-Cation interactions: 9:H.203
- 2 x BPH: BACTERIOPHEOPHYTIN A(Non-covalent)
BPH.36: 10 residues within 4Å:- Chain 8: T.39, A.43, F.98, W.101, F.122, A.125
- Chain 9: L.215, M.219, M.257
- Ligands: BCL.38
5 PLIP interactions:4 interactions with chain 8, 1 interactions with chain 9- Hydrophobic interactions: 8:F.98, 8:W.101, 8:F.122, 8:A.125, 9:L.215
BPH.42: 13 residues within 4Å:- Chain 8: F.182, A.185, L.186, A.189, L.190
- Chain 9: W.130, A.150, F.151, A.154, A.274, V.277, T.278
- Ligands: BCL.40
10 PLIP interactions:7 interactions with chain 9, 3 interactions with chain 8- Hydrophobic interactions: 9:W.130, 9:A.150, 9:A.154, 9:A.274, 9:V.277, 9:V.277, 9:T.278, 8:F.182, 8:L.186, 8:A.189
- 2 x U10: UBIQUINONE-10(Non-covalent)
U10.37: 9 residues within 4Å:- Chain 8: L.190, H.191, L.194, F.217, S.224, I.225, G.226, T.227, I.230
7 PLIP interactions:7 interactions with chain 8- Hydrophobic interactions: 8:L.190, 8:I.225, 8:I.230, 8:I.230
- Hydrogen bonds: 8:I.225, 8:G.226
- pi-Stacking: 8:F.217
U10.43: 9 residues within 4Å:- Chain 9: H.220, T.223, A.249, A.250, W.253, A.261, T.262, M.263, I.266
7 PLIP interactions:7 interactions with chain 9- Hydrophobic interactions: 9:W.253, 9:A.261, 9:I.266
- Hydrogen bonds: 9:H.220, 9:T.223, 9:A.261
- pi-Stacking: 9:W.253
- 1 x FE2: FE (II) ION(Non-covalent)
FE2.39: 3 residues within 4Å:- Chain 9: M.263, I.266, H.267
No protein-ligand interaction detected (PLIP)- 1 x SPN: SPEROIDENONE(Non-covalent)
SPN.44: 20 residues within 4Å:- Chain 9: F.68, F.69, I.71, G.72, L.117, S.120, F.121, M.123, F.124, W.158, M.159, L.161, G.162, F.163, W.172, V.176, Y.178, G.179, I.180
- Ligands: BCL.40
13 PLIP interactions:13 interactions with chain 9
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-17-17-1-1-1-mer
- Ligands
- 38 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)
- 2 x BPH: BACTERIOPHEOPHYTIN A(Non-covalent)
- 2 x U10: UBIQUINONE-10(Non-covalent)
- 1 x FE2: FE (II) ION(Non-covalent)
- 1 x SPN: SPEROIDENONE(Non-covalent)