- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-17-17-1-1-1-mer
- Ligands
- 38 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)
- 2 x BPH: BACTERIOPHEOPHYTIN A(Non-covalent)
BPH.36: 10 residues within 4Å:- Chain 8: T.39, A.43, F.98, W.101, F.122, A.125
- Chain 9: L.215, M.219, M.257
- Ligands: BCL.38
5 PLIP interactions:4 interactions with chain 8, 1 interactions with chain 9- Hydrophobic interactions: 8:F.98, 8:W.101, 8:F.122, 8:A.125, 9:L.215
BPH.42: 13 residues within 4Å:- Chain 8: F.182, A.185, L.186, A.189, L.190
- Chain 9: W.130, A.150, F.151, A.154, A.274, V.277, T.278
- Ligands: BCL.40
10 PLIP interactions:7 interactions with chain 9, 3 interactions with chain 8- Hydrophobic interactions: 9:W.130, 9:A.150, 9:A.154, 9:A.274, 9:V.277, 9:V.277, 9:T.278, 8:F.182, 8:L.186, 8:A.189
- 2 x U10: UBIQUINONE-10(Non-covalent)
U10.37: 9 residues within 4Å:- Chain 8: L.190, H.191, L.194, F.217, S.224, I.225, G.226, T.227, I.230
7 PLIP interactions:7 interactions with chain 8- Hydrophobic interactions: 8:L.190, 8:I.225, 8:I.230, 8:I.230
- Hydrogen bonds: 8:I.225, 8:G.226
- pi-Stacking: 8:F.217
U10.43: 9 residues within 4Å:- Chain 9: H.220, T.223, A.249, A.250, W.253, A.261, T.262, M.263, I.266
7 PLIP interactions:7 interactions with chain 9- Hydrophobic interactions: 9:W.253, 9:A.261, 9:I.266
- Hydrogen bonds: 9:H.220, 9:T.223, 9:A.261
- pi-Stacking: 9:W.253
- 1 x FE2: FE (II) ION(Non-covalent)
- 1 x SPN: SPEROIDENONE(Non-covalent)
SPN.44: 20 residues within 4Å:- Chain 9: F.68, F.69, I.71, G.72, L.117, S.120, F.121, M.123, F.124, W.158, M.159, L.161, G.162, F.163, W.172, V.176, Y.178, G.179, I.180
- Ligands: BCL.40
13 PLIP interactions:13 interactions with chain 9- Hydrophobic interactions: 9:F.68, 9:F.68, 9:F.68, 9:I.71, 9:L.117, 9:F.124, 9:W.158, 9:L.161, 9:W.172, 9:V.176, 9:Y.178, 9:Y.178, 9:I.180
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cao, P. et al., Structural basis for the assembly and quinone transport mechanisms of the dimeric photosynthetic RC-LH1 supercomplex. Nat Commun (2022)
- Release Date
- 2022-05-04
- Peptides
- Light-harvesting protein B-875 alpha chain: ACEGIKMOQSUWY0246
Light-harvesting protein B-875 beta chain: BDFHJLNPRTVXZ1357
Reaction center protein L chain: 8
Reaction center protein M chain: 9
Reaction center protein H chain: a - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
DE
FG
II
KK
OM
QO
SQ
US
WU
YW
1Y
70
92
44
66
CB
BD
EF
GH
JJ
NL
PN
RP
TR
VT
XV
ZX
2Z
81
03
t5
57
38
L9
Ma
H - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 7voy.1
Rba sphaeroides PufX-KO RC-LH1
Light-harvesting protein B-875 alpha chain
Toggle Identical (ACEGIKMOQSU0246)Light-harvesting protein B-875 beta chain
Toggle Identical (B357) Toggle Identical (DFHJLNPRT) Toggle Identical (Z1)Reaction center protein L chain
Reaction center protein M chain
Reaction center protein H chain
Related Entries With Identical Sequence
1e14.1 | 1e6d.1 | 1f6n.1 | 1fnp.1 | 1fnq.1 | 1jgw.1 | 1jgx.1 | 1jgy.1 | 1jgz.1 | 1jh0.1 | 1k6l.1 | 1k6n.1 | 1kby.1 | 1l9b.1 | 1l9j.1 | 1l9j.2 | 1m3x.1 | 1mps.1 | 1pcr.1 | 1qov.1 | 1rg5.1 | 1rgn.1 | 1rqk.1 | 1ry5.1 | 1rzh.1 | 1rzz.1 | 1rzz.2 | 1s00.1 | 1s00.2 | 1umx.1 more...less...1yf6.1 | 1yst.1 | 1z9j.1 | 1z9k.1 | 1z9k.2 | 2bnp.1 | 2bns.1 | 2boz.1 | 2gmr.1 | 2hg3.1 | 2hg9.1 | 2hh1.1 | 2hhk.1 | 2hit.1 | 2hj6.1 | 2j8c.1 | 2j8d.1 | 2jiy.1 | 2jj0.1 | 2rcr.1 | 2uws.1 | 2uwt.1 | 2uwu.1 | 2uwv.1 | 2uww.1 | 2ux3.1 | 2ux4.1 | 2ux5.1 | 2uxj.1 | 2uxk.1 | 2uxl.1 | 2uxm.1 | 2wx5.1 | 3dsy.1 | 3dta.1 | 3dtr.1 | 3dts.1 | 3du2.1 | 3du3.1 | 3duq.1 | 3i4d.1 | 3zum.1 | 3zuw.1 | 4h99.1 | 4h9l.1 | 4hbh.1 | 4hbj.1 | 4in5.1 | 4in7.1 | 4lwy.1 | 4rcr.1 | 4v9g.1 | 4v9g.2 | 4v9g.3 | 4v9g.4 | 4v9g.5 | 4v9g.6 | 4v9g.7 | 4v9g.8 | 4v9g.9 | 4v9g.10 | 4v9g.11 | 4v9g.12 | 4v9g.13 | 4v9g.14 | 4v9g.16 | 4v9g.17 | 4v9g.18 | 4v9g.19 | 4v9g.20 | 4v9g.21 | 4v9g.22 | 4v9g.23 | 4v9g.24 | 4v9g.25 | 4v9g.26 | 4v9g.27 | 4v9g.28 | 4v9g.29 | 4v9g.30 | 4v9g.31 | 4v9g.32 | 4v9g.33 | 4v9g.34 | 4v9g.35 | 4v9g.36 | 4v9g.37 | 4v9g.38 | 4v9g.39 | 4v9g.40 | 4v9g.41 | 4v9g.42 | 4v9g.43 | 4v9g.44 | 4v9g.45 | 4v9g.46 | 4v9g.48 | 4v9g.49 | 4v9g.50 | 4v9g.51 | 4v9g.52 | 4v9g.53 | 4v9g.54 | 4v9g.55 | 4v9g.56 | 4v9g.57 | 4v9g.58 | 4v9g.59 | 4v9g.60 | 4v9g.61 | 4v9g.62 | 4v9g.63 | 4v9g.64 | 5lri.1 | 5lse.1 | 7f0l.1 | 7mh3.1 | 7mh4.1 | 7mh5.1 | 7mh8.1 | 7mh9.1 | 7mha.1 | 7pqd.1 | 7pqd.2 | 7pqd.3 | 7pqd.4 | 7pqd.5 | 7pqd.6 | 7pqd.7 | 7pqd.8 | 7pqd.9 | 7pqd.10 | 7pqd.11 | 7pqd.12 | 7pqd.13 | 7pqd.14 | 7pqd.15 | 7pqd.16 | 7pqd.17 | 7pqd.18 | 7pqd.19 | 7pqd.20 | 7pqd.21 | 7pqd.22 | 7pqd.23 | 7pqd.24 | 7pqd.25 | 7pqd.26 | 7pqd.27 | 7pqd.28 | 7pqd.36 | 7pqd.37 | 7pqd.38 | 7pqd.39 | 7pqd.40 | 7pqd.41 | 7pqd.42 | 7pqd.43 | 7pqd.44 | 7pqd.45 | 7pqd.46 | 7pqd.47 | 7pqd.48 | 7pqd.49 | 7pqd.50 | 7pqd.51 | 7pqd.52 | 7pqd.53 | 7pqd.54 | 7pqd.55 | 7pqd.56 | 7pqd.57 | 7pqd.58 | 7pqd.59 | 7pqd.60 | 7pqd.61 | 7pqd.62 | 7pqd.63 | 7va9.1 | 7va9.2 | 7va9.3 | 7va9.4 | 7va9.5 | 7va9.6 | 7va9.7 | 7va9.8 | 7va9.9 | 7va9.10 | 7va9.11 | 7va9.12 | 7va9.13 | 7va9.14 | 7va9.15 | 7va9.16 | 7va9.17 | 7va9.18 | 7va9.19 | 7va9.20 | 7va9.21 | 7va9.22 | 7va9.23 | 7va9.24 | 7va9.25 | 7va9.26 | 7va9.27 | 7va9.28 | 7va9.29 | 7va9.30 | 7va9.31 | 7va9.33 | 7va9.34 | 7va9.35 | 7va9.36 | 7va9.37 | 7va9.38 | 7va9.39 | 7va9.40 | 7va9.41 | 7va9.42 | 7va9.43 | 7va9.44 | 7va9.45 | 7va9.46 | 7va9.47 | 7va9.48 | 7va9.49 | 7va9.50 | 7va9.51 | 7va9.52 | 7va9.53 | 7va9.54 | 7va9.55 | 7va9.56 | 7va9.57 | 7va9.58 | 7va9.59 | 7va9.60 | 7va9.61 | 7va9.62 | 7va9.63 | 7vb9.1 | 7vnm.1 | 7vny.1 | 7vor.1 | 7vor.2 | 7vor.3 | 7vor.4 | 7vor.5 | 7vor.6 | 7vor.7 | 7vor.8 | 7vor.9 | 7vor.10 | 7vor.11 | 7vor.12 | 7vor.13 | 7vor.14 | 7vor.15 | 7vor.16 | 7vor.17 | 7vor.18 | 7vor.19 | 7vor.20 | 7vor.21 | 7vor.22 | 7vor.23 | 7vor.24 | 7vor.25 | 7vor.26 | 7vor.27 | 7vor.28 | 7vor.29 | 7vor.30 | 7vor.31 | 7vor.34 | 7vor.35 | 7vor.36 | 7vor.37 | 7vor.38 | 7vor.39 | 7vor.40 | 7vor.41 | 7vor.42 | 7vor.43 | 7vor.44 | 7vor.45 | 7vor.46 | 7vor.47 | 7vor.48 | 7vor.49 | 7vor.50 | 7vor.51 | 7vor.52 | 7vor.53 | 7vor.54 | 7vor.55 | 7vor.56 | 7vor.57 | 7vor.58 | 7vor.59 | 7vor.60 | 7vor.61 | 7vor.62 | 7vor.63 | 7vor.64 | 7vot.1 | 7vot.2 | 7vot.3 | 7vot.4 | 7vot.5 | 7vot.6 | 7vot.7 | 7vot.8 | 7vot.9 | 7vot.10 | 7vot.11 | 7vot.12 | 7vot.13 | 7vot.14 | 7vot.15 | 7vot.16 | 7vot.17 | 7vot.18 | 7vot.19 | 7vot.20 | 7vot.21 | 7vot.22 | 7vot.23 | 7vot.24 | 7vot.25 | 7vot.26 | 7vot.27 | 7vot.28 | 7vot.29 | 7vot.30 | 7vot.31 | 7vot.34 | 7vot.35 | 7vot.36 | 7vot.37 | 7vot.38 | 7vot.39 | 7vot.40 | 7vot.41 | 7vot.42 | 7vot.43 | 7vot.44 | 7vot.45 | 7vot.46 | 7vot.47 | 7vot.48 | 7vot.49 | 7vot.50 | 7vot.51 | 7vot.52 | 7vot.53 | 7vot.54 | 7vot.55 | 7vot.56 | 7vot.57 | 7vot.58 | 7vot.59 | 7vot.60 | 7vot.61 | 7vot.62 | 7vot.63 | 7vot.64 | 8vtj.1