SMTL ID : 2f4b.1 (1 other biounit)

Crystal structure of the ligand binding domain of human PPAR-gamma in complex with an agonist

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

1 x EHA: (5-{3-[(6-BENZOYL-1-PROPYL-2-NAPHTHYL)OXY]PROPOXY}-1H-INDOL-1-YL)ACETIC ACID(Non-covalent)

EHA.1: 20 residues within 4Å: Chain A: L.49, E.53, R.74, F.76, G.78, C.79, Q.80, R.82, S.83, H.117, Y.121, L.124, V.133, I.135, M.142, F.157, M.158, K.161, H.243, Y.267 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.49, A:E.53, A:F.76, A:R.82, A:Y.121, A:L.124, A:V.133, A:I.135, A:I.135 Salt bridges: A:H.243 pi-Stacking: A:H.243, A:H.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mahindroo, N. et al., Indol-1-yl Acetic Acids as Peroxisome Proliferator-Activated Receptor Agonists: Design, Synthesis, Structural Biology, and Molecular Docking Studies. J.Med.Chem. (2006)

Release Date

2006-02-14

Peptides

Peroxisome proliferator-activated receptor gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome proliferator-activated receptor gamma

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