SMTL ID : 2fvj.1

A novel anti-adipogenic partial agonist of peroxisome proliferator-activated receptor-gamma (PPARG) recruits pparg-coactivator-1 alpha (PGC1A) but potentiates insulin signaling in vitro

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

hetero-1-1-mer

Ligands

1 x RO0: 1-(3,4-DIMETHOXYBENZYL)-6,7-DIMETHOXY-4-{[4-(2-METHOXYPHENYL)PIPERIDIN-1-YL]METHYL}ISOQUINOLINE(Non-covalent)

RO0.1: 24 residues within 4Å: Chain A: F.20, L.22, A.72, I.75, F.76, C.79, Q.80, R.82, A.86, E.89, I.120, Y.121, M.123, L.124, L.127, V.133, L.134, I.135, L.147, L.150, F.154, F.157, M.158 Ligands: GOL.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:M.123, A:L.124, A:L.124, A:L.124, A:L.127, A:F.157 Hydrogen bonds: A:E.89 Water bridges: A:S.136

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: Q.80, S.83, H.117, Y.121, H.243, L.247, L.263, Y.267 Ligands: RO0.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.80, A:S.83, A:Y.121, A:H.243, A:Y.267

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burgermeister, E. et al., A novel partial agonist of peroxisome proliferator-activated receptor-gamma (PPARgamma) recruits PPARgamma-coactivator-1alpha, prevents triglyceride accumulation, and potentiates insulin signaling in vitro. Mol.Endocrinol. (2006)

Release Date

2006-05-16

Peptides

Peroxisome proliferator-activated receptor gamma: A
Nuclear receptor coactivator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

Nuclear receptor coactivator 1

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