- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- hetero-1-1-1-mer
- Ligands
- 1 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)
- 4 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)
- 2 x U10: UBIQUINONE-10(Non-covalent)
U10.4: 13 residues within 4Å:- Chain B: L.189, H.190, L.193, D.213, F.216, V.220, Y.222, S.223, I.224, G.225, T.226, I.229, L.232
12 PLIP interactions:12 interactions with chain B- Hydrophobic interactions: B:L.189, B:H.190, B:L.193, B:F.216, B:F.216, B:V.220, B:Y.222, B:I.229, B:L.232
- Hydrogen bonds: B:D.213, B:I.224, B:G.225
U10.11: 26 residues within 4Å:- Chain B: F.29, G.35, W.100, R.103
- Chain C: L.213, M.217, H.218, T.221, I.222, A.244, A.247, A.248, W.251, M.255, F.257, N.258, A.259, T.260, M.261, I.264, W.267, M.271
- Ligands: LDA.1, BCL.2, BCL.3, BPH.7
17 PLIP interactions:12 interactions with chain C, 5 interactions with chain B- Hydrophobic interactions: C:L.213, C:M.217, C:W.251, C:M.255, C:F.257, C:A.259, C:I.264, C:I.264, C:W.267, C:W.267, B:F.29, B:F.29, B:F.29, B:W.100, B:W.100
- Hydrogen bonds: C:T.221, C:A.259
- 1 x FE2: FE (II) ION(Non-covalent)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x BPH: BACTERIOPHEOPHYTIN A(Non-covalent)
BPH.7: 29 residues within 4Å:- Chain B: T.38, A.42, I.49, C.92, A.93, A.96, F.97, W.100, E.104, I.117, A.120, F.121, F.123, A.124, Y.148, G.149, I.150, H.153, V.241
- Chain C: Y.209, A.212, L.213, M.217, W.251, T.254, M.255
- Ligands: BCL.2, BCL.3, U10.11
15 PLIP interactions:13 interactions with chain B, 2 interactions with chain C- Hydrophobic interactions: B:A.42, B:I.49, B:A.96, B:A.120, B:F.121, B:F.121, B:F.123, B:A.124, B:Y.148, B:V.241, B:V.241, C:Y.209, C:A.212
- Hydrogen bonds: B:E.104
- pi-Stacking: B:F.121
BPH.10: 22 residues within 4Å:- Chain B: F.181, A.184, L.185, L.189, L.219, V.220
- Chain C: S.58, G.62, L.63, F.66, A.124, V.125, W.128, T.132, T.145, A.148, F.149, A.152, A.272, T.276
- Ligands: BCL.8, BCL.9
14 PLIP interactions:3 interactions with chain B, 11 interactions with chain C- Hydrophobic interactions: B:A.184, B:L.185, B:L.189, C:L.63, C:F.66, C:F.66, C:F.66, C:F.66, C:A.124, C:W.128, C:W.128, C:A.148, C:F.149
- pi-Stacking: C:F.149
- 1 x CDL: CARDIOLIPIN(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wadsten, P. et al., Lipidic sponge phase crystallization of membrane proteins. J.Mol.Biol. (2006)
- Release Date
- 2006-11-07
- Peptides
- Reaction center protein H chain: A
Reaction center protein L chain: B
Reaction center protein M chain: C - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
HB
LC
M - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 2gnu.1
The crystallization of reaction center from Rhodobacter sphaeroides occurs via a new route
Reaction center protein H chain
Reaction center protein L chain
Reaction center protein M chain
Related Entries With Identical Sequence
1aig.1 | 1aig.2 | 1aij.1 | 1aij.2 | 1ds8.1 | 1ds8.2 | 1dv3.1 | 1dv3.2 | 1dv6.1 | 1dv6.2 | 1e14.1 | 1e6d.1 | 1jgw.1 | 1jgx.1 | 1jgy.1 | 1jgz.1 | 1k6l.1 | 1kby.1 | 1l9b.1 | 1l9j.1 | 1l9j.2 | 1m3x.1 | 1mps.1 | 1ogv.1 | 1pcr.1 | 1qov.1 | 1rg5.1 | 1rgn.1 | 1rqk.1 | 1umx.1 more...less...1z9k.1 | 1z9k.2 | 2bnp.1 | 2bns.1 | 2boz.1 | 2hg3.1 | 2hg9.1 | 2hh1.1 | 2hhk.1 | 2hit.1 | 2hj6.1 | 2j8c.1 | 2j8d.1 | 2jiy.1 | 2jj0.1 | 2rcr.1 | 2uws.1 | 2uwt.1 | 2uwu.1 | 2uwv.1 | 2uww.1 | 2ux3.1 | 2ux4.1 | 2ux5.1 | 2uxj.1 | 2uxk.1 | 2uxl.1 | 2uxm.1 | 3i4d.1 | 4h99.1 | 4h9l.1 | 4hbh.1 | 4hbj.1 | 4in6.1 | 4n7k.1 | 4n7l.1 | 4rcr.1 | 4tqq.1 | 7pil.1 | 7pqd.30 | 7pqd.65 | 8vtj.1 | 8vtk.1 | 8vtl.1 | 8vtm.1 | 8vtn.1 | 8vto.1