SMTL ID : 4n7k.1

Zinc Substituted Reaction Center of the Rhodobacter sphaeroides

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.85 Å
Oligo State
hetero-oligomer
Ligands
7 x GOL: GLYCEROL(Non-functional Binders)
1 x GGD: NONADEC-10-ENOIC ACID 2-[3,4-DIHYDROXY-6-HYDROXYMETHYL-5-(3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-2-YLOXY)-TETRAHYDRO-PYRAN-2-YLOXY]-1-OCTADEC-9-ENOYLOXYMETHYL-ETHYL ESTER(Non-covalent)
6 x 2GO: [METHYL 9-ACETYL-14-ETHYL-20-HYDROXY-4,8,13,18-TETRAMETHYL-3-{3-OXO-3-[(3,7,11,15-TETRAMETHYLHEXADEC-2-EN-1-YL)OXY]PROPYL}-3,4,20,21-TETRADEHYDROPHORBINE-21-CARBOXYLATATO(2-)-KAPPA~4~N~23~,N~24~,N~25~,N~26~]ZINC(Non-covalent)
5 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)(Non-functional Binders)
2 x U10: UBIQUINONE-10(Non-covalent)
1 x PO4: PHOSPHATE ION(Non-functional Binders)
2 x HTO: HEPTANE-1,2,3-TRIOL(Non-covalent)
1 x FE: FE (III) ION(Non-covalent)
1 x SPO: SPHEROIDENE(Non-covalent)
1 x CDL: CARDIOLIPIN(Non-covalent)
1 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Saer, R.G. et al., Structural and kinetic properties of Rhodobacter sphaeroides photosynthetic reaction centers containing exclusively Zn-coordinated bacteriochlorophyll as bacteriochlorin cofactors. Biochim.Biophys.Acta (2013)
Release Date
2014-02-05
Peptides
Reaction Center H Chain: A
Reaction center protein L chain: B
Reaction center protein M chain: C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
H
B
L
C
M

Reaction Center H Chain

Reaction center protein L chain

Reaction center protein M chain

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1aig.1 | 1aig.2 | 1aij.1 | 1aij.2 | 1ds8.1 | 1ds8.2 | 1dv3.1 | 1dv3.2 | 1dv6.1 | 1dv6.2 | 1e14.1 | 1e6d.1 | 1jgw.1 | 1jgx.1 | 1jgy.1 | 1jgz.1 | 1k6l.1 | 1kby.1 | 1l9b.1 | 1l9j.1 | 1l9j.2 | 1m3x.1 | 1mps.1 | 1ogv.1 | 1pcr.1 | 1qov.1 | 1rg5.1 | 1rgn.1 | 1rqk.1 | 1umx.1  more...