SMTL ID : 2qge.1

Human transthyretin (TTR) complexed with 2-(3,5-Dimethylphenyl)benzoxazole

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-tetramer

Ligands

4 x MR6: 2-(3,5-DIMETHYLPHENYL)-1,3-BENZOXAZOLE(Non-covalent)

MR6.1: 11 residues within 4Å: Chain A: A.108, L.110, S.117 Chain C: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Ligands: MR6.3 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:K.15, C:L.110, C:L.110 MR6.2: 12 residues within 4Å: Chain B: K.15, L.17, L.110, S.117, T.118, T.119 Chain D: A.108, L.110, S.117, T.118, T.119 Ligands: MR6.4 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain D Hydrophobic interactions: B:K.15, B:L.17, B:L.110, B:L.110, D:A.108 MR6.3: 11 residues within 4Å: Chain A: K.15, L.17, A.108, L.110, S.117, T.118, T.119 Chain C: A.108, L.110, S.117 Ligands: MR6.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:K.15, A:L.110, A:L.110 MR6.4: 12 residues within 4Å: Chain B: A.108, L.110, S.117, T.118, T.119 Chain D: K.15, L.17, L.110, S.117, T.118, T.119 Ligands: MR6.2 5 PLIP interactions: 1 interactions with chain B, 4 interactions with chain D Hydrophobic interactions: B:A.108, D:K.15, D:L.17, D:L.110, D:L.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Johnson, S.M. et al., Biochemical and structural evaluation of highly selective 2-arylbenzoxazole-based transthyretin amyloidogenesis inhibitors. J.Med.Chem. (2008)

Release Date

2008-02-05

Peptides

Transthyretin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Transthyretin

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