SMTL ID : 2yq7.1

Structure of Bcl-xL bound to BimLOCK

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-2-2-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: S.19, S.23, K.36, Q.37, R.40 Chain C: D.16, R.40 8 PLIP interactions: 4 interactions with chain A, 4 interactions with chain C Hydrogen bonds: A:S.19, A:S.23, A:K.36, C:D.16, C:R.40, C:R.40 Water bridges: A:S.19, C:D.16 GOL.2: 7 residues within 4Å: Chain A: D.16, R.40 Chain C: S.19, S.23, K.36, Q.37, R.40 8 PLIP interactions: 5 interactions with chain C, 3 interactions with chain A Hydrogen bonds: C:S.19, C:S.23, C:K.36, A:D.16, A:R.40, A:R.40 Water bridges: C:S.19, C:K.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Okamoto, T. et al., Stabilizing the Pro-Apoptotic Bimbh3 Helix (Bimsahb) Does not Necessarily Enhance Affinity or Biological Activity. Acs Chem.Biol. (2013)

Release Date

2012-11-28

Peptides

BCL-2-LIKE PROTEIN 1: AC
BCL-2-LIKE PROTEIN 11: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

BCL-2-LIKE PROTEIN 1

BCL-2-LIKE PROTEIN 11

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