SMTL ID : 5vx3.1 (1 other biounit)

Bcl-xL in complex with Bim-h3Pc-RT

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-2-2-mer

Ligands

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: S.19, A.33, K.36 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.19, A:S.19, A:K.36 Water bridges: A:S.30 EDO.2: 5 residues within 4Å: Chain A: R.11, V.15 Chain C: A.116, A.117, A.120 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:A.116 EDO.3: 4 residues within 4Å: Chain A: N.77, F.80, R.81, Y.122 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.122, A:Y.122 EDO.4: 3 residues within 4Å: Chain A: V.112, S.113 Chain C: W.29 4 PLIP interactions: 4 interactions with chain A Water bridges: A:Q.109, A:S.113, A:S.113, A:S.113 EDO.5: 4 residues within 4Å: Chain A: E.12, K.36 Chain C: E.12, K.36 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain C Hydrogen bonds: A:E.12, A:K.36, C:K.36 Water bridges: C:E.12, C:K.36 EDO.6: 1 residues within 4Å: Chain D: E.18 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brouwer, J.M. et al., Conversion of Bim-BH3 from Activator to Inhibitor of Bak through Structure-Based Design. Mol. Cell (2017)

Release Date

2017-11-15

Peptides

Bcl-2-like protein 1: AC
Bcl-2-like protein 11: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
E

B
B

D
F

Bcl-2-like protein 1

Bcl-2-like protein 11

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