SMTL ID : 4cin.2 (1 other biounit)

Complex of Bcl-xL with its BH3 domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: G.135, D.138 Ligands: EDO.6 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.135, A:D.138, H2O.1

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.2: 12 residues within 4Å: Chain A: V.15, D.16, S.19, Y.20, S.23, W.29, S.30, M.32, A.33, K.36, Q.37, R.40 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.23, A:S.23, A:S.30 Salt bridges: A:D.16, A:K.36

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: S.28, W.29, S.30 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.29 EDO.4: 1 residues within 4Å: Chain A: W.29 No protein-ligand interaction detected (PLIP) EDO.5: 3 residues within 4Å: Chain A: Q.31, M.32, V.35 No protein-ligand interaction detected (PLIP) EDO.6: 4 residues within 4Å: Chain A: Q.31, D.138, E.142 Ligands: CA.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.142

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, E.F. et al., The Functional Differences of Pro-Survival and Pro-Apoptotic B Cell Lymphoma 2 (Bcl-2) Proteins Depend on Structural Differences in Their Bcl-2 Homology 3 (Bh3) Domains. J.Biol.Chem. (2014)

Release Date

2014-11-12

Peptides

BCL-2-LIKE PROTEIN 1: A
BCL-2-LIKE PROTEIN 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

BCL-2-LIKE PROTEIN 1

BCL-2-LIKE PROTEIN 1

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