SMTL ID : 3j3o.2 (3 other biounits)

Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 160S Poliovirus and C3-Fab Complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-5-5-5-5-5-5-mer

Ligands

5 x GLY- SER- SER- SER- THR: unknown peptide(Non-functional Binders)

GLY-SER-SER-SER-THR.1: 1 residues within 4Å: Ligands: MYR.3 Protein-ligand interaction information (PLIP) not available GLY-SER-SER-SER-THR.4: 1 residues within 4Å: Ligands: MYR.6 Protein-ligand interaction information (PLIP) not available GLY-SER-SER-SER-THR.7: 1 residues within 4Å: Ligands: MYR.9 Protein-ligand interaction information (PLIP) not available GLY-SER-SER-SER-THR.10: 1 residues within 4Å: Ligands: MYR.12 Protein-ligand interaction information (PLIP) not available GLY-SER-SER-SER-THR.13: 1 residues within 4Å: Ligands: MYR.15 Protein-ligand interaction information (PLIP) not available

5 x SPH: SPHINGOSINE(Non-covalent)

SPH.2: 2 residues within 4Å: Chain C: Y.205, S.206 Protein-ligand interaction information (PLIP) not available SPH.5: 2 residues within 4Å: Chain I: Y.205, S.206 Protein-ligand interaction information (PLIP) not available SPH.8: 2 residues within 4Å: Chain O: Y.205, S.206 Protein-ligand interaction information (PLIP) not available SPH.11: 2 residues within 4Å: Chain U: Y.205, S.206 Protein-ligand interaction information (PLIP) not available SPH.14: 2 residues within 4Å: Chain 0: Y.205, S.206 Protein-ligand interaction information (PLIP) not available

5 x MYR: MYRISTIC ACID(Non-covalent)

MYR.3: 5 residues within 4Å: Chain F: G.1, Y.31 Ligands: GLY-SER-SER-SER-THR.1, MYR.6, MYR.15 Protein-ligand interaction information (PLIP) not available MYR.6: 5 residues within 4Å: Chain L: G.1, Y.31 Ligands: MYR.3, GLY-SER-SER-SER-THR.4, MYR.9 Protein-ligand interaction information (PLIP) not available MYR.9: 5 residues within 4Å: Chain R: G.1, Y.31 Ligands: MYR.6, GLY-SER-SER-SER-THR.7, MYR.12 Protein-ligand interaction information (PLIP) not available MYR.12: 5 residues within 4Å: Chain X: G.1, Y.31 Ligands: MYR.9, GLY-SER-SER-SER-THR.10, MYR.15 Protein-ligand interaction information (PLIP) not available MYR.15: 5 residues within 4Å: Chain 3: G.1, Y.31 Ligands: MYR.3, MYR.12, GLY-SER-SER-SER-THR.13 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, J. et al., Conformational shift of a major poliovirus antigen confirmed by immuno-cryogenic electron microscopy. J.Immunol. (2013)

Release Date

2013-07-03

Peptides

C3 antibody, light chain: AGMSY
C3 antibody, heavy chain: BHNTZ
Protein VP1: CIOU0
Protein VP2: DJPV1
Protein VP3: EKQW2
Protein VP4: FLRX3

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

G
L

M
L

S
L

Y
L

B
H

H
H

N
H

T
H

Z
H

C
1

I
1

O
1

U
1

0
1

D
2

J
2

P
2

V
2

1
2

E
3

K
3

Q
3

W
3

2
3

F
4

L
4

R
4

X
4

3
4

C3 antibody, light chain

C3 antibody, heavy chain

Protein VP1

Protein VP2

Protein VP3

Protein VP4

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