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SMTL ID : 3mta.1
Glycogen phosphorylase complexed with 3-bromobenzaldehyde-4-(beta-D-glucopyranosyl)-thiosemicarbazone
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.23 Å
Oligo State
homo-dimer
Ligands
4 x
22O
:
N-({(2E)-2-[(3-bromophenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucopyranosylamine
(Non-covalent)
22O.1:
14 residues within 4Å:
Chain A:
R.60
,
V.64
,
G.186
,
N.187
,
P.188
,
W.189
,
E.190
,
K.191
,
A.192
,
Y.226
,
P.229
Chain B:
F.37
,
T.38
,
V.40
11
PLIP interactions
:
9 interactions with chain A
,
2 interactions with chain B
Hydrophobic interactions:
A:V.64
,
B:V.40
Hydrogen bonds:
A:R.60
,
A:R.60
,
A:E.190
,
A:E.190
,
A:E.190
,
A:A.192
,
B:T.38
Water bridges:
A:R.160
,
A:N.187
22O.2:
20 residues within 4Å:
Chain A:
E.88
,
G.135
,
L.136
,
L.139
,
N.282
,
D.283
,
N.284
,
F.285
,
F.286
,
H.341
,
H.377
,
A.383
,
V.455
,
N.484
,
Y.573
,
E.672
,
A.673
,
S.674
,
G.675
,
T.676
14
PLIP interactions
:
14 interactions with chain A
Hydrogen bonds:
A:N.284
,
A:N.284
,
A:N.284
,
A:H.377
,
A:N.484
,
A:E.672
,
A:E.672
,
A:S.674
,
A:S.674
,
A:G.675
Water bridges:
A:A.673
,
A:A.673
,
A:T.676
pi-Stacking:
A:H.341
22O.3:
14 residues within 4Å:
Chain A:
F.37
,
T.38
,
V.40
Chain B:
R.60
,
V.64
,
G.186
,
N.187
,
P.188
,
W.189
,
E.190
,
K.191
,
A.192
,
Y.226
,
P.229
10
PLIP interactions
:
8 interactions with chain B
,
2 interactions with chain A
Hydrophobic interactions:
B:V.64
,
A:V.40
Hydrogen bonds:
B:R.60
,
B:R.60
,
B:E.190
,
B:E.190
,
B:A.192
,
A:T.38
Water bridges:
B:R.160
,
B:N.187
22O.4:
20 residues within 4Å:
Chain B:
E.88
,
G.135
,
L.136
,
L.139
,
N.282
,
D.283
,
N.284
,
F.285
,
F.286
,
H.341
,
H.377
,
A.383
,
V.455
,
N.484
,
Y.573
,
E.672
,
A.673
,
S.674
,
G.675
,
T.676
14
PLIP interactions
:
14 interactions with chain B
Hydrogen bonds:
B:N.284
,
B:N.284
,
B:N.284
,
B:H.377
,
B:H.377
,
B:N.484
,
B:E.672
,
B:S.674
,
B:S.674
,
B:G.675
Water bridges:
B:A.673
,
B:A.673
,
B:T.676
pi-Stacking:
B:H.341
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Alexacou, K.M. et al., The binding of beta-D-glucopyranosyl-thiosemicarbazone derivatives to glycogen phosphorylase: a new class of inhibitors. Bioorg.Med.Chem. (2010)
Release Date
2011-01-05
Peptides
Glycogen phosphorylase, muscle form:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
Export Alignment
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Secondary Structure
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Glycogen phosphorylase, muscle form
Toggle Identical (AB)
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