SMTL ID : 3p1a.1

Structure of human Membrane-associated Tyrosine- and Threonine-specific cdc2-inhibitory kinase MYT1 (PKMYT1)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: G.258, Q.262 Ligands: DMS.11 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.258, A:Q.262 EDO.2: 6 residues within 4Å: Chain A: A.86, V.120, T.136, E.137, L.138, C.139 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:C.139, A:C.139 EDO.3: 3 residues within 4Å: Chain A: G.260, L.264, P.270 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.260 EDO.4: 3 residues within 4Å: Chain A: K.79, E.80, D.81 1 PLIP interactions: 1 interactions with chain A Water bridges: A:K.79 EDO.5: 5 residues within 4Å: Chain A: R.29, V.31, S.32, F.33, L.104 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.29, A:R.29, A:S.32, A:S.32 EDO.6: 3 residues within 4Å: Chain A: E.72, F.74, R.89 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.72, A:R.89 EDO.7: 3 residues within 4Å: Chain A: S.92, P.93, F.94 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.92 EDO.8: 2 residues within 4Å: Chain A: E.259, Q.263 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.263 EDO.9: 2 residues within 4Å: Chain A: P.97, K.98 No protein-ligand interaction detected (PLIP) EDO.10: 3 residues within 4Å: Chain A: Y.70, K.88, D.200 1 PLIP interactions: 1 interactions with chain A Water bridges: A:D.200

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.11: 5 residues within 4Å: Chain A: P.220, H.256, G.257, W.261 Ligands: EDO.1 2 PLIP interactions: 2 interactions with chain A pi-Cation interactions: A:W.261, A:W.261 DMS.12: 7 residues within 4Å: Chain A: S.153, A.249, F.273, T.274, A.275, G.276, L.277 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.276 Water bridges: A:S.153, A:A.275

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chaikuad, A. et al., Structure of human Membrane-associated Tyrosine- and Threonine-specific cdc2-inhibitory kinase MYT1 (PKMYT1). To be Published

Release Date

2010-11-03

Peptides

Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase

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