SMTL ID : 3s9q.1

Crystal structure of native type 1 ribosome inactivating protein from Momordica balsamina at 1.67 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: T.226, N.227, T.229, S.230 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.226, A:N.227 Water bridges: A:N.227, A:S.230, A:S.230, A:N.231

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: L.6, G.8, A.9, P.130, A.175 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.8, A:A.9 Water bridges: A:A.9, A:A.9 GOL.3: 3 residues within 4Å: Chain A: N.33, T.234, Q.238 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.33, A:T.234, A:Q.238 Water bridges: A:Q.238

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kushwaha, G.S. et al., Crystal structures of a type-1 ribosome inactivating protein from Momordica balsamina in the bound and unbound states. Biochim.Biophys.Acta (2012)

Release Date

2011-07-06

Peptides

Ribosome inactivating protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosome inactivating protein

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