SMTL ID : 4act.1

CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH LIGAND C-17

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

4 x FT0: 3-hydroxy-4-phenoxybenzaldehyde(Non-covalent)

FT0.1: 11 residues within 4Å: Chain A: K.15, L.17, A.108, A.109, L.110, S.117, T.118, T.119 Chain C: L.17, L.110 Ligands: FT0.3 9 PLIP interactions: 2 interactions with chain C, 7 interactions with chain A Hydrophobic interactions: C:L.17, C:L.110, A:K.15, A:L.17, A:A.108, A:A.108, A:L.110 Hydrogen bonds: A:L.110, A:T.119 FT0.2: 11 residues within 4Å: Chain B: K.15, L.17, A.108, A.109, L.110, S.117, T.118, T.119 Chain D: L.17, L.110 Ligands: FT0.4 9 PLIP interactions: 7 interactions with chain B, 2 interactions with chain D Hydrophobic interactions: B:K.15, B:L.17, B:A.108, B:A.108, B:L.110, D:L.17, D:L.110 Hydrogen bonds: B:L.110, B:T.119 FT0.3: 11 residues within 4Å: Chain A: L.17, L.110 Chain C: K.15, L.17, A.108, A.109, L.110, S.117, T.118, T.119 Ligands: FT0.1 9 PLIP interactions: 7 interactions with chain C, 2 interactions with chain A Hydrophobic interactions: C:K.15, C:L.17, C:A.108, C:A.108, C:L.110, A:L.17, A:L.110 Hydrogen bonds: C:L.110, C:T.119 FT0.4: 11 residues within 4Å: Chain B: L.17, L.110 Chain D: K.15, L.17, A.108, A.109, L.110, S.117, T.118, T.119 Ligands: FT0.2 9 PLIP interactions: 7 interactions with chain D, 2 interactions with chain B Hydrophobic interactions: D:K.15, D:L.17, D:A.108, D:A.108, D:L.110, B:L.17, B:L.110 Hydrogen bonds: D:L.110, D:T.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tomar, D. et al., Crystallographic Study of Novel Transthyretin Inhibitors: Unique Mechanism of Negative-Cooperativity between Two T4 Binding Sites. To be Published

Release Date

2012-12-05

Peptides

TRANSTHYRETIN: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

TRANSTHYRETIN

Related Entries With Identical Sequence