- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 3 x ACY: ACETIC ACID(Non-functional Binders)
ACY.5: 8 residues within 4Å:- Chain A: E.56, A.57, E.58, F.71, K.74, L.75
- Chain B: R.78
- Ligands: ACY.13
6 PLIP interactions:1 interactions with chain B, 5 interactions with chain A- Salt bridges: B:R.78, A:K.74
- Hydrophobic interactions: A:F.71, A:K.74
- Hydrogen bonds: A:A.57, A:E.58
ACY.6: 5 residues within 4Å:- Chain A: A.140, E.141, H.142, T.145
- Ligands: GOL.14
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.141, A:H.142, A:T.145
- Salt bridges: A:H.142
ACY.13: 8 residues within 4Å:- Chain A: R.78
- Chain B: E.56, A.57, E.58, F.71, K.74, L.75
- Ligands: ACY.5
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:F.71, B:K.74
- Hydrogen bonds: B:E.56, B:A.57
- Salt bridges: B:K.74, A:R.78
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.7: 6 residues within 4Å:- Chain A: A.69, Y.70, L.73, A.100
- Chain B: T.145, M.149
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:T.145, B:T.145, A:A.69
GOL.14: 7 residues within 4Å:- Chain A: T.145, M.149
- Chain B: A.69, Y.70, L.73, A.100
- Ligands: ACY.6
No protein-ligand interaction detected (PLIP)- 2 x I2E: 3-(1,3-benzodioxol-5-yl)propanoic acid(Non-covalent)
I2E.8: 13 residues within 4Å:- Chain A: A.76, G.77, R.78, W.79, P.80, I.175, I.179
- Chain B: Y.54, N.155, H.156, G.168, E.169, V.172
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:P.80, A:I.175, A:I.179, B:E.169, B:V.172
- Salt bridges: A:K.82
I2E.15: 12 residues within 4Å:- Chain A: Y.54, N.155, H.156, G.168, E.169, V.172
- Chain B: G.77, R.78, W.79, P.80, I.175, I.179
7 PLIP interactions:3 interactions with chain B, 4 interactions with chain A- Hydrophobic interactions: B:P.80, B:I.175, B:I.179, A:E.169, A:V.172
- Hydrogen bonds: A:E.169
- Water bridges: A:S.166
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wielens, J. et al., Parallel Screening of Low Molecular Weight Fragment Libraries: Do Differences in Methodology Affect Hit Identification?. J.Biomol.Screen (2013)
- Release Date
- 2012-12-19
- Peptides
- INTEGRASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
SMTL ID : 4ahr.1
Parallel screening of a low molecular weight compound library: do differences in methodology affect hit identification
INTEGRASE
Toggle Identical (AB)Related Entries With Identical Sequence
3av9.1 | 3ava.1 | 3avb.1 | 3avc.1 | 3avg.1 | 3avh.1 | 3avi.1 | 3avj.1 | 3avk.1 | 3avl.1 | 3avm.1 | 3avn.1 | 3nf6.1 | 3nf7.1 | 3nf8.1 | 3nf9.1 | 3nfa.1 | 4ah9.1 | 4ahs.1 | 4aht.1 | 4ahu.1 | 4ahv.1 | 4ce9.1 | 4cea.1 | 4ceb.1 | 4cec.1 | 4ced.1 | 4cee.1 | 4cef.1 | 4ceo.1 more...less...4ceq.1 | 4cer.1 | 4ces.1 | 4cez.1 | 4cf0.1 | 4cf1.1 | 4cf2.1 | 4cf8.1 | 4cf9.1 | 4cfa.1 | 4cfb.1 | 4cfc.1 | 4cfd.1 | 4cgd.1 | 4cgf.1 | 4cgg.1 | 4cgh.1 | 4cgi.1 | 4cgj.1 | 4chn.1 | 4cho.1 | 4chp.1 | 4chq.1 | 4chy.1 | 4chz.1 | 4cie.1 | 4cif.1 | 4cig.1 | 4cj3.1 | 4cj4.1 | 4cj5.1 | 4cje.1 | 4cjf.1 | 4cjk.1 | 4cjl.1 | 4cjp.1 | 4cjq.1 | 4cjr.1 | 4cjs.1 | 4cjt.1 | 4cju.1 | 4cjv.1 | 4cjw.1 | 4ck1.1 | 4ck2.1 | 4ck3.1 | 4ovl.1