- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 4 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 6 residues within 4Å:- Chain A: E.56, A.57, F.71, K.74, L.75
- Chain B: R.78
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:F.71, A:K.74
- Hydrogen bonds: A:A.57
- Salt bridges: A:K.74, B:R.78
ACT.11: 3 residues within 4Å:- Chain A: Y.70, K.74
- Ligands: ACT.17
7 PLIP interactions:4 interactions with chain A, 3 interactions with chain B- Hydrophobic interactions: A:Y.70
- Hydrogen bonds: A:Y.70, A:Y.70
- Salt bridges: A:K.74, B:K.74
- Water bridges: B:V.59, B:Q.148
ACT.16: 6 residues within 4Å:- Chain A: R.78
- Chain B: E.56, A.57, F.71, K.74, L.75
7 PLIP interactions:6 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:F.71, B:K.74
- Hydrogen bonds: B:E.56, B:E.56, B:A.57
- Salt bridges: B:K.74, A:R.78
ACT.17: 3 residues within 4Å:- Chain B: Y.70, K.74
- Ligands: ACT.11
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:Q.148
- Salt bridges: A:K.74, B:K.74
- Water bridges: B:Y.70
- 3 x CL: CHLORIDE ION(Non-functional Binders)
- 5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.7: 6 residues within 4Å:- Chain A: N.155, H.156, R.158, S.166, E.169
- Ligands: EDO.19
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.158, A:S.166
EDO.8: 9 residues within 4Å:- Chain A: A.76, G.77, R.78, W.79, P.80
- Chain B: Y.54, N.155, H.156, G.168
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:N.155, A:G.77
EDO.9: 5 residues within 4Å:- Chain A: Q.139, A.140, E.141, H.142, T.145
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:Q.139, A:E.141, A:H.142, A:H.142, A:T.145
EDO.19: 10 residues within 4Å:- Chain A: Y.54, N.155, H.156, G.168
- Chain B: A.76, G.77, R.78, W.79, P.80
- Ligands: EDO.7
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:G.77
EDO.20: 4 residues within 4Å:- Chain B: Q.139, E.141, H.142, T.145
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:E.141, B:H.142, B:H.142
- 1 x H75: 2-(4-bromophenyl)-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-3(2H)-one(Non-covalent)
- 1 x LYS: LYSINE(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Peat, T.S. et al., Interrogating HIV Integrase for Compounds that Bind- a Sampl Challenge. J.Comput.Aided Mol.Des. (2014)
- Release Date
- 2013-12-18
- Peptides
- INTEGRASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
SMTL ID : 4chz.1
Interrogating HIV integrase for compounds that bind- a SAMPL challenge
INTEGRASE
Toggle Identical (AB)Related Entries With Identical Sequence
3av9.1 | 3ava.1 | 3avb.1 | 3avc.1 | 3avg.1 | 3avh.1 | 3avi.1 | 3avj.1 | 3avk.1 | 3avl.1 | 3avm.1 | 3avn.1 | 3nf6.1 | 3nf7.1 | 3nf8.1 | 3nf9.1 | 3nfa.1 | 4ah9.1 | 4ahr.1 | 4ahs.1 | 4aht.1 | 4ahu.1 | 4ahv.1 | 4ce9.1 | 4cea.1 | 4ceb.1 | 4cec.1 | 4ced.1 | 4cee.1 | 4cef.1 more...less...4ceo.1 | 4ceq.1 | 4cer.1 | 4ces.1 | 4cez.1 | 4cf0.1 | 4cf1.1 | 4cf2.1 | 4cf8.1 | 4cf9.1 | 4cfa.1 | 4cfb.1 | 4cfc.1 | 4cfd.1 | 4cgd.1 | 4cgf.1 | 4cgg.1 | 4cgh.1 | 4cgi.1 | 4cgj.1 | 4chn.1 | 4cho.1 | 4chp.1 | 4chq.1 | 4chy.1 | 4cie.1 | 4cif.1 | 4cig.1 | 4cj3.1 | 4cj4.1 | 4cj5.1 | 4cje.1 | 4cjf.1 | 4cjk.1 | 4cjl.1 | 4cjp.1 | 4cjq.1 | 4cjr.1 | 4cjs.1 | 4cjt.1 | 4cju.1 | 4cjv.1 | 4cjw.1 | 4ck1.1 | 4ck2.1 | 4ck3.1 | 4ovl.1