SMTL ID : 4pm1.1

Human transthyretin (TTR) complexed with 16-alpha-bromo-estradiol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.23 Å

Oligo State

homo-tetramer

Ligands

4 x ESZ: (14beta,16alpha,17alpha)-16-bromoestra-1,3,5(10)-triene-3,17-diol(Non-covalent)

ESZ.1: 11 residues within 4Å: Chain A: K.15, L.17, A.108, L.110, S.117, T.119 Chain C: K.15, A.108, L.110, S.117 Ligands: ESZ.5 10 PLIP interactions: 7 interactions with chain A, 3 interactions with chain C Hydrophobic interactions: A:K.15, A:L.17, C:K.15, C:A.108 Water bridges: A:S.117, A:S.117, A:S.117, A:S.117 pi-Cation interactions: A:K.15 Hydrogen bonds: C:S.117 ESZ.4: 11 residues within 4Å: Chain B: K.15, L.17, A.108, L.110, S.117, T.119 Chain D: K.15, L.17, A.108, L.110 Ligands: ESZ.8 10 PLIP interactions: 4 interactions with chain B, 6 interactions with chain D Hydrophobic interactions: B:K.15, B:L.17, D:K.15, D:L.17, D:A.108 pi-Cation interactions: B:K.15 Halogen bonds: B:S.117 Water bridges: D:S.117, D:S.117, D:S.117 ESZ.5: 11 residues within 4Å: Chain A: K.15, A.108, L.110, S.117 Chain C: K.15, L.17, A.108, L.110, S.117, T.119 Ligands: ESZ.1 8 PLIP interactions: 3 interactions with chain A, 5 interactions with chain C Hydrophobic interactions: A:K.15, A:A.108, C:K.15, C:L.17 Hydrogen bonds: A:S.117 Water bridges: C:S.117, C:S.117 pi-Cation interactions: C:K.15 ESZ.8: 11 residues within 4Å: Chain B: K.15, L.17, A.108, L.110 Chain D: K.15, L.17, A.108, L.110, S.117, T.119 Ligands: ESZ.4 10 PLIP interactions: 6 interactions with chain B, 4 interactions with chain D Hydrophobic interactions: B:K.15, B:L.17, B:A.108, D:K.15, D:L.17 Water bridges: B:S.117, B:S.117, B:S.117 pi-Cation interactions: D:K.15 Halogen bonds: D:S.117

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: P.86, F.87, Y.114 Chain B: T.96, N.98, Y.105 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:T.96, B:N.98 EDO.3: 6 residues within 4Å: Chain B: F.64, N.98, D.99, P.102, R.103, Y.105 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.98, B:R.103 Water bridges: B:G.101, B:R.103 EDO.6: 6 residues within 4Å: Chain C: P.86, F.87, Y.114 Chain D: T.96, N.98, Y.105 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:T.96, D:N.98 EDO.7: 6 residues within 4Å: Chain D: F.64, N.98, D.99, P.102, R.103, Y.105 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:N.98, D:R.103 Water bridges: D:G.101, D:R.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ciccone, L. et al., Transthyretin complexes with curcumin and bromo-estradiol: evaluation of solubilizing multicomponent mixtures. N Biotechnol (2014)

Release Date

2014-10-08

Peptides

Transthyretin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Transthyretin

Related Entries With Identical Sequence