SMTL ID : 5hho.1

Crystal Structure of the JM22 TCR in complex with HLA-A*0201 in complex with M1-G4E

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x GLY- ILE- LEU- GLU- PHE- VAL- PHE- THR- LEU: M1-G4E, GILEFVFTL(Non-covalent)

GLY-ILE-LEU-GLU-PHE-VAL-PHE-THR-LEU.1: 31 residues within 4Å: Chain A: M.5, Y.7, E.63, K.66, V.67, A.69, H.70, T.73, D.77, L.81, R.97, Y.99, H.114, Y.123, T.143, K.146, W.147, V.152, Q.155, L.156, Y.159, W.167, Y.171 Chain C: S.93, Q.94, G.95 Chain D: D.29, Q.49, I.50, R.95, S.96 33 PLIP interactions: 25 interactions with chain A, 6 interactions with chain D, 2 interactions with chain C Hydrophobic interactions: A:Y.7, A:K.66, A:K.66, A:V.67, A:A.69, A:D.77, A:L.81, A:Y.99, A:Y.123, A:T.143, A:W.147, A:V.152, A:Q.155, A:L.156, A:L.156, A:Y.159, D:Q.49, D:I.50 Hydrogen bonds: A:E.63, A:D.77, A:Y.99, A:T.143, A:K.146, A:Y.171, A:Y.171, D:D.29, D:Q.49, D:Q.49, D:S.96, C:S.93, C:Q.94 Salt bridges: A:K.66, A:K.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Valkenburg, S.A. et al., Molecular basis for universal HLA-A*0201-restricted CD8+ T-cell immunity against influenza viruses. Proc.Natl.Acad.Sci.USA (2016)

Release Date

2016-03-23

Peptides

HLA class I histocompatibility antigen, A-2 alpha chain: A
Beta-2-microglobulin: B
JM22 TCR alpha chain: C
JM22 TCR beta chain: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
D

D
E

HLA class I histocompatibility antigen, A-2 alpha chain

Beta-2-microglobulin

JM22 TCR alpha chain

JM22 TCR beta chain

Related Entries With Identical Sequence