SMTL ID : 5o5a.1

Crystal structure of the human BRPF1 bromodomain in complex with BZ032

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 4 residues within 4Å: Chain A: L.81, Y.91, V.95, R.98 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.91, A:Y.91, A:R.98, A:R.98

1 x 9LN: 1-ethyl-~{N}-methyl-2,3-bis(oxidanylidene)-~{N}-[(1-phenylpyrazol-4-yl)methyl]-4~{H}-quinoxaline-6-carboxamide(Non-covalent)

9LN.2: 11 residues within 4Å: Chain A: I.28, F.29, E.31, P.32, V.33, P.34, E.37, C.80, Y.83, N.84, F.90 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.33, A:Y.83, A:F.90 Hydrogen bonds: A:I.28, A:N.84 Water bridges: A:C.80 pi-Stacking: A:F.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, J. et al., Structure-based discovery of selective BRPF1 bromodomain inhibitors. Eur J Med Chem (2018)

Release Date

2018-06-13

Peptides

Peregrin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peregrin

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