SMTL ID : 5q0m.1

Ligand binding to FARNESOID-X-RECEPTOR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 9L1: 5-{[(3beta,5beta,14beta,17alpha)-3-hydroxy-24-oxocholan-24-yl]amino}benzene-1,3-dicarboxylic acid(Non-covalent)

9L1.1: 18 residues within 4Å: Chain A: R.25, M.26, T.31, F.45, L.48, T.49, M.51, M.89, R.92, S.93, I.96, L.101, L.109, I.118, Y.122, Y.130, H.208, F.222 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:M.26, A:F.45, A:L.48, A:I.96, A:I.96, A:L.109, A:Y.122 Hydrogen bonds: A:M.26 Salt bridges: A:R.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gaieb, Z. et al., D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. J. Comput. Aided Mol. Des. (2018)

Release Date

2017-07-05

Peptides

Bile acid receptor: A
COACTIVATOR PEPTIDE SRC-1 HD3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bile acid receptor

COACTIVATOR PEPTIDE SRC-1 HD3

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