SMTL ID : 5q0z.2 (1 other biounit)

Ligand binding to FARNESOID-X-RECEPTOR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 9M1: ethyl (5S)-3-(3,4-difluorobenzene-1-carbonyl)-1,1-dimethyl-1,2,3,4,5,6-hexahydroazepino[4,5-b]indole-5-carboxylate(Non-covalent)

9M1.1: 21 residues within 4Å: Chain A: I.30, I.34, L.48, T.49, M.51, A.52, H.55, M.89, F.90, R.92, S.93, I.96, F.97, L.109, I.113, M.126, Y.130, M.211, L.212, W.215, W.230 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.34, A:L.48, A:L.48, A:A.52, A:F.90, A:R.92, A:I.96, A:I.113, A:Y.130, A:L.212, A:W.215, A:W.230 Hydrogen bonds: A:L.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gaieb, Z. et al., D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. J. Comput. Aided Mol. Des. (2018)

Release Date

2017-07-05

Peptides

Bile acid receptor: A
COACTIVATOR PEPTIDE SRC-1 HD3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Bile acid receptor

COACTIVATOR PEPTIDE SRC-1 HD3

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