SMTL ID : 5q1h.3 (3 other biounits)

Ligand binding to FARNESOID-X-RECEPTOR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 9NP: (2S)-N,2-dicyclohexyl-2-{2-[4-(1H-tetrazol-5-yl)phenyl]-1H-benzimidazol-1-yl}acetamide(Non-covalent)

9NP.1: 19 residues within 4Å: Chain A: I.34, N.44, L.48, M.51, H.55, M.89, F.90, R.92, S.93, I.96, F.97, I.113, S.116, I.118, Y.130, H.208, M.211, L.212, W.215 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.34, A:N.44, A:L.48, A:H.55, A:F.90, A:R.92, A:I.96, A:I.96, A:F.97, A:I.113, A:I.113, A:I.118, A:Y.130 Hydrogen bonds: A:S.93, A:Y.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gaieb, Z. et al., D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. J. Comput. Aided Mol. Des. (2018)

Release Date

2017-07-05

Peptides

Bile acid receptor: A
COACTIVATOR PEPTIDE SRC-1 HD3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

Bile acid receptor

COACTIVATOR PEPTIDE SRC-1 HD3

Related Entries With Identical Sequence