SMTL ID : 5q0o.1 (1 other biounit)

Ligand binding to FARNESOID-X-RECEPTOR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: Q.177, K.181, F.191 Ligand excluded by PLIP

1 x 9L7: (2S)-2-{2-[4-(benzenecarbonyl)phenyl]-1H-benzimidazol-1-yl}-N,2-dicyclohexylacetamide(Non-covalent)

9L7.2: 22 residues within 4Å: Chain A: I.34, N.44, I.47, L.48, M.51, H.55, M.89, F.90, R.92, S.93, I.96, F.97, I.113, S.116, I.118, M.126, Y.130, H.208, M.211, L.212, W.215, W.230 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:I.34, A:N.44, A:I.47, A:L.48, A:L.48, A:L.48, A:H.55, A:F.90, A:F.90, A:F.90, A:R.92, A:I.96, A:I.96, A:F.97, A:I.113, A:I.113, A:Y.130, A:H.208, A:M.211, A:L.212, A:L.212, A:L.212, A:W.215, A:W.230 Hydrogen bonds: A:S.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gaieb, Z. et al., D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. J. Comput. Aided Mol. Des. (2018)

Release Date

2017-07-05

Peptides

Bile acid receptor: A
COACTIVATOR PEPTIDE SRC-1 HD3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bile acid receptor

COACTIVATOR PEPTIDE SRC-1 HD3

Related Entries With Identical Sequence