SMTL ID : 5q0i.1

Ligand binding to FARNESOID-X-RECEPTOR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 0X0: 2-[(3,4-dimethoxyphenyl)-(4-methylphenyl)sulfonyl-amino]-N-(2,4-dimethylpentan-3-yl)ethanamide(Non-covalent)

0X0.1: 21 residues within 4Å: Chain A: M.26, I.34, N.44, I.47, L.48, M.51, A.52, H.55, M.89, F.90, S.93, I.96, F.97, L.101, I.113, I.123, M.126, F.127, Y.130, W.215, W.230 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.34, A:L.48, A:M.89, A:F.90, A:F.90, A:F.97, A:L.101, A:F.127, A:W.230 Hydrogen bonds: A:N.44, A:S.93, A:Y.130 pi-Stacking: A:W.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gaieb, Z. et al., D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. J. Comput. Aided Mol. Des. (2018)

Release Date

2017-07-05

Peptides

Bile acid receptor: A
COACTIVATOR PEPTIDE PGC-1A PPAR GAMMA COACTIVATOR: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bile acid receptor

COACTIVATOR PEPTIDE PGC-1A PPAR GAMMA COACTIVATOR

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