SMTL ID : 5tsv.1

HIV-1 CA hexamer with NUP153 peptide - R3 crystal form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-6-3-mer

Ligands

3 x FLU: 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID(Non-covalent)

FLU.1: 7 residues within 4Å: Chain B: W.80, H.84, P.125, E.128, I.129, R.132, W.133 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:W.80, B:E.128, B:I.129, B:I.129 Hydrogen bonds: B:W.133 Salt bridges: B:R.132 FLU.2: 7 residues within 4Å: Chain E: W.80, H.84, P.125, E.128, I.129, R.132, W.133 6 PLIP interactions: 6 interactions with chain E Hydrophobic interactions: E:W.80, E:E.128, E:I.129, E:I.129 Hydrogen bonds: E:W.133 Salt bridges: E:R.132 FLU.3: 7 residues within 4Å: Chain H: W.80, H.84, P.125, E.128, I.129, R.132, W.133 6 PLIP interactions: 6 interactions with chain H Hydrophobic interactions: H:W.80, H:E.128, H:I.129, H:I.129 Hydrogen bonds: H:W.133 Salt bridges: H:R.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Skorupka, K. et al., HIV-1 CA hexamer with NUP153 peptide - R3 crystal form. To Be Published

Release Date

2017-11-08

Peptides

HIV-1 CA protein: ABDEGH
Nuclear pore complex protein Nup153: CFI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D
A

E
B

G
A

H
B

C
D

F
D

I
D

HIV-1 CA protein

Nuclear pore complex protein Nup153

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