SMTL ID : 6bht.2 (1 other biounit)

HIV-1 CA hexamer in complex with IP6, orthorhombic crystal form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

homo-hexamer

Ligands

2 x IHP: INOSITOL HEXAKISPHOSPHATE(Non-covalent)

IHP.1: 6 residues within 4Å: Chain A: R.18 Chain B: R.18 Chain C: R.18 Chain D: R.18 Chain E: R.18 Chain F: R.18 7 PLIP interactions: 3 interactions with chain E, 1 interactions with chain A, 1 interactions with chain F, 2 interactions with chain D Salt bridges: E:R.18, E:R.18, E:R.18, A:R.18, F:R.18, D:R.18 Hydrogen bonds: D:R.18 IHP.2: 5 residues within 4Å: Chain A: R.18 Chain B: R.18 Chain D: R.18 Chain E: N.21 Chain F: R.18 7 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A, 1 interactions with chain D, 3 interactions with chain F, 1 interactions with chain E Hydrogen bonds: B:R.18, F:R.18, F:N.21, E:N.21 Salt bridges: A:R.18, D:R.18, F:R.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dick, R.A. et al., Inositol phosphates are assembly co-factors for HIV-1. Nature (2018)

Release Date

2018-08-01

Peptides

Capsid protein p24: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

C
I

D
J

E
K

F
L

Capsid protein p24

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