SMTL ID : 5tsx.1 (1 other biounit)

HIV-1 CA hexamer with NUP153 peptide - P1 crystal form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-6-3-mer

Ligands

2 x FLU: 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID(Non-covalent)

FLU.1: 7 residues within 4Å: Chain A: W.80, H.84, P.125, E.128, I.129, R.132, W.133 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.80, A:P.125, A:E.128, A:I.129, A:I.129 Hydrogen bonds: A:W.133 Water bridges: A:E.76, A:E.76 Salt bridges: A:R.132 pi-Cation interactions: A:H.84 FLU.2: 8 residues within 4Å: Chain D: E.76, W.80, H.84, P.125, E.128, I.129, R.132, W.133 7 PLIP interactions: 7 interactions with chain D Hydrophobic interactions: D:W.80, D:P.125, D:I.129, D:I.129 Hydrogen bonds: D:W.133 Water bridges: D:E.76 Salt bridges: D:R.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Skorupka, K. et al., HIV-1 CA hexamer with NUP153 peptide - P1 crystal form. To Be Published

Release Date

2017-11-08

Peptides

HIV-1 CA protein: ABCDEF
Nuclear pore complex protein Nup153: GHI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

C
E

D
H

E
I

F
K

G
M

H
P

I
R

HIV-1 CA protein

Nuclear pore complex protein Nup153

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