SMTL ID : 6pjg.1

HIV-1 Protease NL4-3 WT in Complex with LR3-97

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x ORV: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,4S,5S)-4-hydroxy-5-{[N-(methoxycarbonyl)-L-alanyl]amino}-1,6-diphenylhexan-2-yl]carbamate(Non-covalent)

ORV.1: 30 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: R.8, L.23, D.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 19 PLIP interactions: 10 interactions with chain B, 9 interactions with chain A Hydrophobic interactions: B:I.50, B:P.81, B:V.82, B:I.84, A:P.81, A:V.82, A:I.84 Hydrogen bonds: B:D.25, B:G.27, B:D.29, B:D.30, B:D.30, A:G.27, A:G.27, A:D.29, A:G.48 Water bridges: B:I.50, A:D.30, A:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rusere, L.N. et al., Structural Analysis of Potent Hybrid HIV-1 Protease Inhibitors Containing Bis-tetrahydrofuran in a Pseudosymmetric Dipeptide Isostere. J.Med.Chem. (2020)

Release Date

2020-07-01

Peptides

Protease NL4-3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Protease NL4-3

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