SMTL ID : 6rjq.1

Fragment AZ-006 binding at the TAZpS89/14-3-3 sigma interface

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

hetero-2-2-mer

Ligands

4 x JT2: 4-[[(2~{S})-1-azanylpropan-2-yl]amino]-6-(sulfanylmethyl)-1-benzothiophene-2-carboximidamide(Non-covalent)

JT2.1: 10 residues within 4Å: Chain A: E.19, C.43, E.44, N.47, L.48, V.51, D.220 Chain B: S.8, L.9, Q.10 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:E.44, B:Q.10 Hydrogen bonds: A:E.19, B:S.8, B:S.8 JT2.2: 10 residues within 4Å: Chain A: Q.98, D.102, L.105, D.109, Y.133, L.136, D.144, R.147, I.148, S.151 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.148 Hydrogen bonds: A:D.102, A:Y.133, A:R.147 JT2.3: 10 residues within 4Å: Chain C: E.19, C.43, E.44, N.47, L.48, V.51, D.220 Chain D: S.8, L.9, Q.10 5 PLIP interactions: 3 interactions with chain D, 2 interactions with chain C Hydrophobic interactions: D:Q.10, C:E.44 Hydrogen bonds: D:S.8, D:S.8, C:E.19 JT2.4: 10 residues within 4Å: Chain C: Q.98, D.102, L.105, D.109, Y.133, L.136, D.144, R.147, I.148, S.151 6 PLIP interactions: 6 interactions with chain C Hydrophobic interactions: C:I.148 Hydrogen bonds: C:D.102, C:D.102, C:Y.133, C:R.147 Water bridges: C:D.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guillory, X. et al., Fragment-based Differential Targeting of PPI Stabilizer Interfaces. J.Med.Chem. (2020)

Release Date

2020-06-17

Peptides

14-3-3 protein sigma: AC
TAZpS89: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
P

D
P

14-3-3 protein sigma

TAZpS89

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