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SMTL ID : 6slw.1

Fragment AZ-004 binding at the TAZpS89/14-3-3 sigma interface

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-2-2-mer

Ligands

4 x L1T: 4-methyl-5-phenyl-thiophene-2-carboximidamide(Non-covalent)

L1T.1:	8 residues within 4Å: Chain A: E.19, C.43, E.44, N.47, L.48, V.51 Chain B: S.8, Q.10 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:E.44, A:E.44 Hydrogen bonds: A:E.19, A:E.19
L1T.2:	7 residues within 4Å: Chain A: K.200, F.203, D.204, R.229, L.232, T.233, T.236 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.203, A:L.232, A:L.232 Water bridges: A:K.200
L1T.3:	8 residues within 4Å: Chain C: E.19, C.43, E.44, N.47, L.48, V.51 Chain D: S.8, Q.10 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:E.44, C:E.44 Hydrogen bonds: C:E.19, C:E.19
L1T.4:	7 residues within 4Å: Chain C: K.200, F.203, D.204, R.229, L.232, T.233, T.236 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:F.203, C:L.232, C:L.232 Water bridges: C:K.200

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Guillory, X. et al., Fragment-based Differential Targeting of PPI Stabilizer Interfaces. J.Med.Chem. (2020)

Release Date

2020-06-17

Peptides

14-3-3 protein sigma: AC
WW domain-containing transcription regulator protein 1: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
P

D
P

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

14-3-3 protein sigma

Toggle Identical (AC)

WW domain-containing transcription regulator protein 1

Toggle Identical (BD)

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