6y7t.3 | SWISS-MODEL Template Library

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SMTL ID : 6y7t.3 (2 other biounits)

Engineered conjugation of lysine-specific molecular tweezers with ExoS derived peptidic inhibitor enhance affinity towards target protein 14-3-3 through ditopic binding

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1:	4 residues within 4Å: Chain A: E.88, Y.89, K.92 Chain B: K.14 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:E.88, B:K.14
NA.2:	2 residues within 4Å: Chain A: K.14 Chain B: E.88 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:K.14, B:E.88 Water bridges: B:K.92, B:K.92

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3:

5 residues within 4Å:

Chain B: Q.98, D.102, L.136, D.144, I.148

1 PLIP interactions:

1 interactions with chain B

Water bridges: B:Q.98

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Guillory, X. et al., Supramolecular Enhancement of a Natural 14-3-3 Protein Ligand. J.Am.Chem.Soc. (2021)

Release Date

2021-03-31

Peptides

14-3-3 protein sigma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
K

B
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

14-3-3 protein sigma

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