7ort.1 | SWISS-MODEL Template Library

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SMTL ID : 7ort.1

Ternary complex of 14-3-3 sigma, p27pT198 phosphopeptide, and WQ176

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.33 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 0HP: ~{N}-[(5-carbamimidoyl-3-phenyl-thiophen-2-yl)methyl]-2-(1~{H}-indol-6-yl)ethanamide(Non-covalent)

0HP.1:	12 residues within 4Å: Chain A: E.19, C.43, E.44, N.47, L.48, V.51, P.172, I.173, D.220, L.223, I.224, L.227 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:E.44, A:L.223, A:I.224, A:I.224 Hydrogen bonds: A:E.19, A:E.19
0HP.5:	12 residues within 4Å: Chain C: E.19, C.43, E.44, N.47, L.48, V.51, P.172, I.173, D.220, L.223, I.224, L.227 6 PLIP interactions: 6 interactions with chain C Hydrophobic interactions: C:E.44, C:L.223, C:I.224, C:I.224 Hydrogen bonds: C:E.19, C:E.19

4 x MG: MAGNESIUM ION(Non-covalent)

MG.2:	2 residues within 4Å: Chain A: E.7, R.8 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.7, H₂O.1, H₂O.6
MG.4:	1 residues within 4Å: Chain A: E.193 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.193
MG.6:	2 residues within 4Å: Chain C: E.7, R.8 3 PLIP interactions: 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.7, H₂O.9, H₂O.14
MG.8:	1 residues within 4Å: Chain C: E.193 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:E.193

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3:	6 residues within 4Å: Chain A: E.88, Y.89, K.92 Chain C: M.6, K.14, F.30 Ligand excluded by PLIP
CL.7:	6 residues within 4Å: Chain A: M.6, K.14, F.30 Chain C: E.88, Y.89, K.92 Ligand excluded by PLIP

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Centorrino, F. et al., A crystallography-based study of fragment extensions into the 14-3-3 binding groove. To Be Published

Release Date

2022-06-22

Peptides

14-3-3 protein sigma: AC
Cyclin-dependent kinase inhibitor 1B: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
P

D
P

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Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

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NGLPV2D

14-3-3 protein sigma

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Cyclin-dependent kinase inhibitor 1B

Toggle Identical (BD)

Related Entries With Identical Sequence

3lw1.1 | 6qhl.1 | 6qhm.1 | 6qzr.1 | 6qzr.2 | 6qzr.3 | 6qzr.4 | 6qzs.1 | 6rjl.1 | 6rjq.1 | 6rjz.1 | 6rk8.1 | 6rki.1 | 6rkk.1 | 6rkm.1 | 6rl3.1 | 6rl4.1 | 6rl6.1 | 6rm5.1 | 6rm7.1 | 6rwh.1 | 6rwi.1 | 6rws.1 | 6rwu.1 | 6rx2.1 | 6s39.1 | 6s3c.1 | 6s40.1 | 6s9q.1 | 6slw.1 more...less...

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