SMTL ID : 7cis.1

Peptide modification of MHC class I molecules

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ARG- ARG- PHE- SEP- ARG- SEP- PRO- ILE- ARG: ARG-ARG-PHE-SEP-ARG-SEP-PRO-ILE-ARG(Non-covalent)

ARG-ARG-PHE-SEP-ARG-SEP-PRO-ILE-ARG.1: 27 residues within 4Å: Chain A: M.5, Y.7, H.9, T.24, E.45, R.62, E.63, I.66, C.67, A.69, T.73, D.74, D.77, Y.84, L.95, Y.99, D.116, T.143, K.146, W.147, V.152, Q.155, L.156, Y.159, E.163, W.167, Y.171 40 PLIP interactions: 40 interactions with chain A Hydrophobic interactions: A:Y.7, A:I.66, A:Y.99, A:W.147, A:V.152, A:Q.155, A:L.156, A:Y.159, A:W.167 Hydrogen bonds: A:Y.7, A:T.24, A:T.24, A:T.24, A:R.62, A:R.62, A:E.63, A:D.77, A:Y.99, A:Y.99, A:T.143, A:Q.155, A:Y.159, A:Y.171 Water bridges: A:R.62, A:E.63, A:K.70, A:K.70, A:K.70, A:T.73, A:D.74, A:N.97, A:N.97, A:W.147 Salt bridges: A:E.45, A:R.62, A:D.74, A:D.77, A:D.116, A:K.146, A:E.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, Y. et al., Phosphosite-dependent presentation of dual phosphorylated peptides by MHC class I molecules. Iscience (2022)

Release Date

2022-03-09

Peptides

MHC class I antigen: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MHC class I antigen

Beta-2-microglobulin

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