SMTL ID : 8bs9.2 (1 other biounit)

Structure of USP36 in complex with Ubiquitin-PA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.77, C.81, C.87, C.90 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.77, A:C.81, A:C.87, A:C.90 ZN.2: 4 residues within 4Å: Chain A: C.177, C.180, C.224, C.227 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.177, A:C.180, A:C.224, A:C.227

1 x AYE: prop-2-en-1-amine(Covalent)

AYE.3: 7 residues within 4Å: Chain A: N.48, N.51, C.53, Q.128, G.303, H.304 Chain B: G.75 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.303

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

O'Dea, R. et al., Molecular basis for ubiquitin/Fubi cross-reactivity in USP16 and USP36. Nat.Chem.Biol. (2023)

Release Date

2023-07-12

Peptides

Ubiquitin carboxyl-terminal hydrolase 36: A
Polyubiquitin-B: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Ubiquitin carboxyl-terminal hydrolase 36

Polyubiquitin-B

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