SMTL ID : 2j7q.2 (1 other biounit)

Crystal structure of the ubiquitin-specific protease encoded by murine cytomegalovirus tegument protein M48 in complex with a ubquitin-based suicide substrate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: K.128, P.129, P.131, V.132, Y.133, V.198, Y.199, Y.221 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:P.131, A:Y.133, A:Y.133

1 x GVE: METHYL 4-AMINOBUTANOATE(Covalent)

GVE.2: 7 residues within 4Å: Chain A: G.20, S.21, C.23, Y.76, V.140, F.141 Chain B: G.75 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.141 Hydrogen bonds: A:V.140

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 1 residues within 4Å: Chain B: E.18 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.18, H2O.12, H2O.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schlieker, C. et al., Structure of a Herpesvirus-Encoded Cysteine Protease Reveals a Unique Class of Deubiquitinating Enzymes. Mol.Cell (2007)

Release Date

2007-03-20

Peptides

MCMV TEGUMENT PROTEIN M48 ENCODED UBIQUITIN- SPECIFIC PROTEASE, M48USP: A
UBIQUITIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

MCMV TEGUMENT PROTEIN M48 ENCODED UBIQUITIN- SPECIFIC PROTEASE, M48USP

UBIQUITIN

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