SMTL ID : 8hz9.1

Crystal structure of AtHPPD-Y181136 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

homo-dimer

Ligands

2 x CO: COBALT (II) ION(Non-covalent)

CO.1: 4 residues within 4Å: Chain A: H.198, H.280, E.366 Ligands: O4C.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.198, A:H.280, A:E.366, H2O.2 CO.3: 4 residues within 4Å: Chain B: H.198, H.280, E.366 Ligands: O4C.4 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.198, B:H.280, B:E.366, H2O.8

2 x O4C: 5-methyl-6-[(2-methyl-3-oxidanylidene-1H-pyrazol-4-yl)carbonyl]-3-propan-2-yl-1,2,3-benzotriazin-4-one(Non-covalent)

O4C.2: 14 residues within 4Å: Chain A: H.198, V.200, V.241, P.252, H.280, Q.351, F.353, F.364, E.366, F.391, G.392, F.396, L.399 Ligands: CO.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.353, A:F.364 Water bridges: A:Q.351 pi-Stacking: A:F.353 O4C.4: 14 residues within 4Å: Chain B: H.198, V.200, V.241, P.252, H.280, Q.351, F.353, F.364, E.366, F.391, G.392, F.396, L.399 Ligands: CO.3 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:F.353, B:F.364 Water bridges: B:Q.351 pi-Stacking: B:F.353

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dong, J. et al., Crystal structure of AtHPPD-Y181136 complex. To Be Published

Release Date

2023-12-20

Peptides

4-hydroxyphenylpyruvate dioxygenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

4-hydroxyphenylpyruvate dioxygenase

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