SMTL ID : 8qb2.1

Crystal Structure of BRPF1 bromodomain in complex with acetyl-pyrrole derivative compound 79

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

monomer

Ligands

1 x GKI: 1-[2-methyl-4-(3-methylbutyl)-5-(2-piperazin-1-yl-1,3-thiazol-4-yl)-1~{H}-pyrrol-3-yl]ethanone

GKI.1: 11 residues within 4Å: Chain A: I.28, F.29, V.33, P.34, E.37, V.38, Y.41, C.80, Y.83, N.84, F.90 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.29, A:V.33, A:V.33, A:Y.41, A:Y.83, A:F.90 Hydrogen bonds: A:I.28, A:N.84 pi-Stacking: A:F.90

1 x NO3: NITRATE ION

NO3.2: 3 residues within 4Å: Chain A: S.78, L.81, K.82 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.78

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cazzanelli, G. et al., Dual BET/BRPF1 inhibitors induce morphological alteration and cellular death in various human cancer cell lines. To be published

Release Date

2024-09-11

Peptides

Peregrin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peregrin

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