SMTL ID : 8ryn.1

Structure of S2 TCR in complex with HLA-A*11:01 bound to ELFSYLIEK peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x GLU- LEU- PHE- SER- TYR- LEU- ILE- GLU- LYS: ELFSYLIEK peptide

GLU-LEU-PHE-SER-TYR-LEU-ILE-GLU-LYS.1: 37 residues within 4Å: Chain A: M.5, Y.7, Y.9, M.45, Q.62, E.63, N.66, V.67, A.69, Q.70, T.73, D.77, T.80, L.81, Y.84, I.97, Y.99, R.114, D.116, Y.123, T.143, K.146, W.147, A.150, Q.155, Q.156, Y.159, R.163, W.167, Y.171 Chain C: A.30, Y.32, S.53, A.96 Chain D: Y.32, T.97, R.98 39 PLIP interactions: 30 interactions with chain A, 3 interactions with chain D, 6 interactions with chain C Hydrophobic interactions: A:Y.7, A:V.67, A:A.69, A:L.81, A:Y.99, A:Y.123, A:T.143, A:W.147, A:A.150, A:Q.155, A:Y.159, A:W.167, C:Y.32, C:A.96 Hydrogen bonds: A:Y.7, A:Q.62, A:E.63, A:D.77, A:Y.84, A:Y.99, A:Y.99, A:D.116, A:D.116, A:A.150, D:R.98, C:Y.32, C:Y.32 Water bridges: A:N.66, A:D.77, A:D.77, A:T.80, A:R.163, A:R.163, D:G.99, D:A.100, C:A.96, C:A.96 Salt bridges: A:K.146, A:R.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karuppiah, V., Structure of S2 TCR in complex with HLA-A*11:01 bound to ELFSYLIEK peptide. To Be Published

Release Date

2024-09-04

Peptides

MHC class I antigen: A
Beta-2-microglobulin: B
TCR alpha: C
TCR beta: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
D

D
E

MHC class I antigen

Beta-2-microglobulin

TCR alpha

TCR beta

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