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Coordinates: PDB Format Compare
Method: ELECTRON MICROSCOPY
Oligo State: hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands: None
Links: RCSB PDBe PDBe-KB PDBj PDBsum CATH
Citation: Lauer, S.M. et al., The proline-rich antimicrobial peptide Api137 disrupts large ribosomal subunit assembly and induces misfolding. Nat Commun (2025)
Release Date: 2025-01-22
Peptides: Large ribosomal subunit protein bL34: A
Large ribosomal subunit protein bL36A: B
50S ribosomal protein L3: E
Large ribosomal subunit protein uL4: F
Large ribosomal subunit protein uL5: G
Large ribosomal subunit protein uL6: H
Large ribosomal subunit protein bL9: I
Large ribosomal subunit protein uL13: J
Large ribosomal subunit protein uL15: K
Large ribosomal subunit protein bL17: L
Large ribosomal subunit protein uL18: M
Large ribosomal subunit protein bL20: N
Large ribosomal subunit protein bL21: O
Large ribosomal subunit protein uL23: P
Large ribosomal subunit protein uL24: Q
Large ribosomal subunit protein bL25: R
Large ribosomal subunit protein bL27: S
Large ribosomal subunit protein bL28: T
Large ribosomal subunit protein uL29: U
Large ribosomal subunit protein uL30: V
UPF0307 protein YjgA: W
SMTL:PDB: SMTL Chain Id:
PDB Chain Id:
A
2
B
4
E
D
F
E
G
F
H
G
I
H
J
J
K
L
L
N
M
O
N
Q
O
R
P
T
Q
U
R
V
S
W
T
X
U
Y
V
Z
W
C

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Large ribosomal subunit protein bL34

Large ribosomal subunit protein bL36A

50S ribosomal protein L3

Large ribosomal subunit protein uL4

Large ribosomal subunit protein uL5

Large ribosomal subunit protein uL6

Large ribosomal subunit protein bL9

Large ribosomal subunit protein uL13

Large ribosomal subunit protein uL15

Large ribosomal subunit protein bL17

Large ribosomal subunit protein uL18

Large ribosomal subunit protein bL20

Large ribosomal subunit protein bL21

Large ribosomal subunit protein uL23

Large ribosomal subunit protein uL24

Large ribosomal subunit protein bL25

Large ribosomal subunit protein bL27

Large ribosomal subunit protein bL28

Large ribosomal subunit protein uL29

Large ribosomal subunit protein uL30

UPF0307 protein YjgA

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Cartoon
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