O15530 (PDPK1_HUMAN) Homo sapiens (Human)

3-phosphoinositide-dependent protein kinase 1 UniProtKBInterProSTRINGInteractive Modelling

556 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; )

Sequence Features

 205Proton acceptor.
 92-94ATP.
 160-162ATP.
 83-330Protein kinase domain
IPR000719PF00069
 446-547PDK1-type, PH domain
IPR033931PF14593

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Crystal structure of PDK1 in complex with ATP and PIFtide Heteromer
Q16513;
GOL;ATP;4rrv76-359
phosphoinositide-dependent kinase-1 (PDK1) with lead compoundhomo-2-mer JMZ;GOL; 12×SO4;3nun71-358
'Discovery of a Novel, Potent and Selective Inhibitor of 3-Phosphoinositide Dependent Kinase (PDK1)'homo-2-mer GOL;3RW; 14×SO4;3rwq72-359
'Discovery of a Novel, Potent and Selective Inhibitor of 3-Phosphoinositide Dependent Kinase (PDK1)'homo-2-mer GOL; 12×SO4;ABQ;3rwp73-359
Crystal structure of PDK1 in complex with a pyrazoloquinazoline inhibitorhomo-2-mer 12×GOL;CKG; 12×SO4;2xch73-359
Novel Isoquinolone PDK1 Inhibitors Discovered through Fragment-Based Lead Discoveryhomo-2-mer GOL;3S1;SO4;3sc173-359
phosphoinositide-dependent kinase-1 (PDK1) with fragment11homo-2-mer GOL;JOZ; 20×SO4;3nuu73-358
phosphoinositide-dependent kinase-1 (PDK1) with fragment17homo-2-mer GOL;JPZ;SO4;3nuy73-358
CRYSTAL STRUCTURE OF HUMAN PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 (PDK1) 3-{5-[2-Oxo-5-ureid...homo-2-mer 464;SO4; 16×GOL;2pe274-359
phosphoinositide-dependent kinase-1 (PDK1) with fragment8homo-2-mer GOL;SO4;JNZ;3nus73-358
Crystal structure of PDK1 in complex with a pyrazoloquinazoline inhibitorhomo-2-mer GOL;MH4;SO4;2xck76-359
Human PDK1 Kinase Domain in Complex with Allosteric Compound PS210 Bound to the PIF-Pocketmonomer CL;NA;MN;DMS;ATP;21O;4aw166-359
Crystal structure of PDK1 in complex with ATP and the PIF-pocket ligand RF4monomer GOL;ATP;RF4;4xx971-359
Crystal structure of PDK1 in complex with ATP and the PIF-pocket ligand RS2monomer GOL;R2S;ATP;4rqv71-359
Structure of human PDK1 kinase domain in complex with staurosporinemonomer GOL;SO4;STU;1oky72-360
Structure of human PDK1 kinase domain in complex with BIM-8monomer GOL;SO4;BI8;1uvr71-359
DISCOVERY OF NOVEL 7-AZAINDOLES AS PDK1 INHIBITORSmonomer 63L;SO4;5ho771-359
DISCOVERY OF NOVEL 7-AZAINDOLES AS PDK1 INHIBITORSmonomer 62O;SO4;5hng71-359
Crystal structure of an extender (SPD28345)-modified human PDK1 complex 2monomer SYP;3pwy71-359
Structure of human PDK1 kinase domain in complex with LY333531monomer LY4;GOL;SO4;1uu373-360
Structure of PDK1-S241A mutant kinase domainmonomer GOL;SO4;ATP;2biy72-359
Phosphoinositide-Dependent Kinase-1 (PDK1) kinase domain with 1,1-Dimethylethyl {(3R,6S)-1-[2-ami...monomer GOL;SO4;3Q5;3qd371-358
Phosphoinositide-Dependent Kinase-1 (PDK1) kinase domain with 1,1-Dimethylethyl{(3R,5R)-1-[2-amin...monomer 3Q6;SO4;3qd471-358
DISCOVERY OF NOVEL 7-AZAINDOLES AS PDK1 INHIBITORSmonomer 63E;SO4;5ho871-358
Human PDK1 Kinase Domain in Complex with Allosteric Compound PSE10 Bound to the PIF-Pocketmonomer CL;78W;DMS;ATP;DTD;5lvo73-359
Human PDK1 Kinase Domain in Complex with Allosteric Compound 7 Bound to the PIF-Pocketmonomer NA;DTD;DMS;ATP;SVQ;5ack73-359
Structure of human PDK1 kinase domain in complex with BIM-2monomer GOL;BI2;SO4;1uu773-359
Structure of human PDK1 kinase domain in complex with BIM-1monomer GOL;SO4;BI1;1uu872-358
Structure of human PDK1 kinase domain in complex with UCN-01monomer GOL;SO4;UCN;1okz73-359
PDK1 in complex with inhibitor MP6monomer MP6;3nay76-362
Human PDK1 Kinase Domain in Complex with Compound PS653 Bound to the ATP-Binding Sitemonomer 537;DMS;DTD;5lvl74-359
Crystal structure of PDK1 in complex with ATP and the PIF-pocket ligand RS1monomer GOL;EPE;R1S;ATP;4rqk74-359
Structure of human PDK1 kinase domain in complex with BIM-3monomer GOL;SO4;BI3;1uu972-357
Phosphoinositide-Dependent Kinase-1 (PDK1) kinase domain with (2R,5S)-1-[2-Amino-6-(3-amino-1H-in...monomer GOL;SO4;3Q4;3qd073-358
PDK1 mutant bound to allosteric disulfide fragment activator 2A2monomer BI4;2A2;3orz74-359
CRYSTAL STRUCTURE OF HUMAN PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 (PDK1) {2-Oxo-3-[1-(1H-pyr...monomer GOL;SO4;517;2pe174-359
Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)amino]phenyl]amino]-4-pyrimid...monomer GOL;LI8;SO4;CL;1z5m74-359
Phosphoinositide-Dependent Kinase-1 (PDK1) kinase domain with 4-[2-Amino-6-(3-amino-1H-indazol-6-...monomer 3Q3;GOL;SO4;3qcy73-358
Phosphoinositide-Dependent Kinase-1 (PDK1) kinase domain with 6-{2-Amino-6-[(3R)-3-methyl-4-morph...monomer GOL;SO4;3Q2;3qcx73-358
CRYSTAL STRUCTURE OF HUMAN PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 (PDK1) 5-Hydroxy-3-[1-(1H-...monomer 39Z;SO4;GOL;2pe074-359
'Phosphoinositide-Dependent Kinase-1 (PDK1) kinase domain with 6-[2-Amino-6-(4-morpholinyl)-4-pyr...monomer GOL;3Q1;SO4;3qcs73-358
'Phosphoinositide-Dependent Kinase-1 (PDK1) kinase domain with 6-(3-Amino-1H-indazol-6-yl)-N4-eth...monomer GOL;3Q0;SO4;3qcq73-358
Human PDK1-PKCzeta Kinase Chimeramonomer NA;ATP;DTD;4ct275-359
Human PDK1 Kinase Domain in Complex with Adenosine Bound to the ATP-Binding Sitemonomer ADN;CL;DTD;5lvn75-359
Human PDK1 Kinase Domain in Complex with Allosteric Compound PS182 Bound to the PIF-Pocketmonomer MJF;DMS;MG;ATP;DTD;4aw075-359
PDK1 in complex with inhibitor MP7monomer MP7;3nax76-360
Human PDK1 Kinase Domain in Complex with Allosteric Activator PS171 Bound to the PIF-Pocketmonomer MG;CL;ATP;AZ7;4a0775-359
'Crystal structure of Human PDK1 kinase domain in complex with an allosteric activator bound to t...monomer P47;EPE;ATP;3hrf75-359
Human PDK1 Kinase Domain in Complex with Allosteric Activator PS114 Bound to the PIF-Pocketmonomer DMS;A06;ATP;CL;4a0675-359
PDK-1 in complex with the inhibitor Compound-8imonomer 8I1;3iop75-359
PDK1 mutant bound to allosteric disulfide fragment inhibitor 1F8monomer 1F8;CL;3orx75-359
Phosphoinositide-dependent protein kinase 1 (PDK-1) in complex with compound 9monomer 9BD;3h9o75-359
PDK1 in complex with Compound 8hmonomer 8H1;SO4;3ion75-359
Human PDK1 Kinase Domain in Complex with an HM-Peptide Bound to the PIF-Pocketmonomer ATP;5lvp75-359
'Crystal Structure of the Phosphoinositide-dependent Kinase-1 (PDK-1)Catalytic Domain bound to a ...monomer 253;SO4;PSE;2r7b75-359
Human PDK1 Kinase Domain in Complex with Adenine Bound to the ATP-Binding Sitemonomer ADE;DTD;5lvm76-359
'Human PDK1-PKCiota Kinase Chimera in Complex with Allosteric Compound PS267 Bound to the PIF-Poc...monomer DMS;S26;ATP;DTT;5mrd76-359
PDK1 in complex with DFG-OUT inhibitor xxxmonomer MP7;3qc476-359
'Human PDK1-PKCzeta Kinase Chimera in Complex with Allosteric Compound PS315 Bound to the PIF-Poc...monomer 31S;DMS;ATP;DTD;4ct176-359
Crystal structure of a mutant of human PDK1 Kinase domain in complex with ATPmonomer ATP;3hrc76-359
DISCOVERY OF NOVEL 7-AZAINDOLES AS PDK1 INHIBITORSmonomer 61Y;SO4;5hkm76-358
PDK1 mutant bound to allosteric disulfide fragment activator JS30monomer BI4;J30;SO4;CL;3otu77-359
Rapid preparation of triazolyl substituted NH-heterocyclic kinase inhibitors via one-pot Sonogash...monomer 3RC;3rcj77-358
Crystal Structure of the PDK1 Pleckstrin Homology (PH) domainmonomer GOL;SO4;1w1h410-556
'Crystal Structure of the PDK1 Pleckstrin Homology (PH) domain bound to DiC4-phosphatidylinositol...monomer 4PT;1w1g409-550
'Crystal Structure of the PDK1 Pleckstrin Homology (PH) domain bound to Inositol (1,3,4,5)-tetrak...monomer GOL;AU;4IP;1w1d409-550
Structure of the PDK1 PH domain K465E mutantmonomer GOL;SO4;2vki410-549

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer -4.394mk0.1.A77-549
28.25

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
4monomer0.401w1h.2.A282-429
100.00
3monomer-3.984mk0.1.A77-524
28.47
2monomerATP;-0.422biy.1.A22-308
99.68
3monomer-4.404mvf.1.A70-397
32.84
5monomer9BD;-0.513h9o.1.A75-359
100.00
5monomer-4.854mvf.1.A70-423
33.15