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P0A7Z6 (RPOA_ECO57) Escherichia coli O157:H7

DNA-directed RNA polymerase subunit alpha UniProtKBInterProSTRINGInteractive Modelling

329 aa; Sequence (Fasta) 291 identical sequences

Sequence Features

 29-228DNA-directed RNA polymerase, RpoA/D/Rpb3 -type
IPR011263PF01193
 60-156DNA-directed RNA polymerase, insert doma in
IPR011262PF01000
 245-308RNA polymerase, alpha subunit, C-termina l
IPR011260PF03118

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
'Three-dimensional EM structure of an intact activator-dependent transcription initiation complex' Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579; P0ACJ8;
CMP;3iyd1-328
Crystal Structure of Escherichia coli RNA polymerase - Sigma54 Holoenzyme complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; R4YEY9;
ZN;5byh4-327
CryoEM structure of E.coli RNA polymerase paused elongation complex bound to NusA Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P0AFF6;
MG;ZN;6flq6-329
'X-ray crystal structure of the Escherichia coli RNA polymerase in complex with Benzoxazinorifamy... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;ZN;1RM;4kn73-325
X-ray crystal structure of the Escherichia coli RNA polymerase in complex with Rifampin Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
ZN;RFP;MG;4kmu3-325
'X-ray crystal structure of Escherichia coli sigma70 holoenzyme in complex with Guanosine tetraph... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
G4P;ZN;4jk13-325
'X-ray crystal structure of the Escherichia coli RNA polymerase in complex with Benzoxazinorifamy... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
ZN;1RL;MG;4kn43-325
'X-ray crystal structure of Escherichia coli sigma70 holoenzyme in complex with guanosine pentaph... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
ZN;0O2;4jk23-325
RNA polymerase model placed by Molecular replacement into X-ray diffraction map of DNA-bound RNA ... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800;
5ezk3-325
Crystal Structure of Escherichia coli RNA polymerase - Sigma54 Holoenzyme complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; R4YEY9;
ZN;MG;5nwt4-325
structure of sigmaN-holoenzyme Heteromer
P0A7Z6; B7MIX3; P0A8T8; B7MFL0; A0A0J4U551;
MG;ZN;5ui86-327
Escherichia coli RNA polymerase in complex with squaramide compound 8. Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; A7ZTK1; P00579;
4C6;MG;ZN;4yfk6-325
Escherichia coli RNA polymerase RpoB H526Y mutant Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;ZN;5uaq6-325
X-ray crystal structur of Escherichia coli RNA polymerase sigma70 holoenzyme Heteromer
P0A7Z6; P0A8V4; P0A8T8; P0A802; P00579;
MG;ZN;4yg26-325
X-ray crystal structure of Escherichia coli RNA polymerase and TraR complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579; P41065;
MG;ZN;5w1s6-325
Crystal structure of Escherichia coli RNA polymerase in complex with salinamide A Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;ZN;4mex5-324
Crystal structure of Escherichia coli RNA polymerase holoenzyme Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;ZN;4mey5-324
X-ray crystal structure of Escherichia coli RNA polymerase and DksA/ppGpp complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579; P0ABS1;
G4P;MG;ZN;5vsw6-325
X-ray crystal structure of Escherichia coli RNA polymerase and DksA complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579; P0ABS1;
MG;ZN;5w1t6-325
Cryo-EM structure of bacterial RNA polymerase-sigma54 holoenzyme transcription open complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P06223;
6gh54-323
Crystal structure of Escherichia coli RNA polymerase in complex with CBRP18 Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;ZN;4OE;4zh46-324
Crystal structure of Escherichia coli RNA polymerase in complex with CBRH16-Br Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;ZN;4OD;4zh36-324
Crystal structure of Escherichia coli RNA polymerase in complex with CBR703 Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
4OB;MG;ZN;4zh26-324
The cryo-EM structure of a bacterial class I transcription activation complex Heteromer
P0A7Z6; B7MIX3; P0A8T8; B7MFL0; P00579; P0ACK0;
ZN;MG;CMP;6b6h6-324
Escherichia coli RNA polymerase in complex with squaramide compound 14 (N-[3,4-dioxo-2-(4-{[4-(tr... Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; A7ZTK1; P00579;
MG;4C2;ZN;4yfn1-317
Escherichia coli RNA polymerase in complex with Myxopyronin B Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; A7ZTK1; P00579;
MG;ZN;4C4;4yfx6-317
'Cryo-EM structure of RNA polymerase-sigma54 holoenzyme with promoter DNA and transcription activ... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P37344; P06223;
5nss2-239
Cryo-EM structure of RNA polymerase-sigma54 holo enzyme with promoter DNA closed complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P06223;
5nsr4-238
'Cryo-EM structure of bacterial RNA polymerase-sigma54 holoenzyme initial transcribing complex' Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P06223;
6gfw4-238
'Cryo-EM structure of bacterial RNA polymerase-sigma54 holoenzyme intermediate partially loaded c... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P06223;
6gh64-238
'pseudo-atomic model of the RNA polymerase lambda-based antitermination complex solved by cryo-EM' Heteromer
P0A7Z4; P03045; P0A8V2; P0A8T7; P0A7R5; P0AFG0; P0A780; P0AFF6; P0A800;
MG;ZN;5ms01-235
Molecular model of Escherichia coli core RNA polymerase Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800;
MG;ZN;3lu01-235
Escherichia coli RNA polymerase mutant - RpoB D516V Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;ZN;5uag6-238
Escherichia coli RNA polymerase and Rifampin complex, RpoB D516V mutant Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;RFP;ZN;5uah6-238
Structure of THE RNA POLYMERASE LAMBDA-BASED ANTITERMINATION COMPLEX Heteromer
P0A7Z6; P0AFF8; P0A782; P0A7R7; P0AFG1; P03045; P0A802; P0A8V4; P0A8T8;
MG;ZN;6gov4-235
E. Coli RNA Polymerase complexed with NusG Heteromer
P0A7Z6; B7MIX3; P0A8T8; P0AFG1;
5tbz4-234
Cryo-EM structure of E. coli RNAP sigma70 open complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;ZN;6ca06-236
CryoEM structure of E.coli RNA polymerase elongation complex bound with RfaH Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P0AFW0;
MG;ZN;6c6s4-234
CryoEM structure of E.coli RNA polymerase elongation complex bound with RfaH Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P0AFW0;
MG;ZN;6c6t4-234
CryoEM structure of E.coli his pause elongation complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800;
MG;ZN;6asx4-234
Cryo-EM structure of E. coli RNAP sigma70 holoenzyme Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;ZN;6c9y6-236
CryoEM structure of E.coli RNA polymerase elongation complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800;
MG;ZN;6alh4-234
E. coli expressome Heteromer
P0A7Z4; P0A7V3; P0A7V8; P0A7W1; P02358; P02359; P0A7W7; P0A7X3; P0A7R5; P0A7R9; P0A7S3; P0A7S9; P0AG59; P0ADZ4; P0A7T3; P0AG63; P0A7T7; P0A7U3; P0A7U7; P0A7V0; P68679; P0A8V2; P0A8T7; P0A800;
ZN;5my14-234
SigmaS-transcription initiation complex with 4-nt nascent RNA Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P13445;
DPO;ZN;MG;5ipl6-235
'Escherichia coli RNA polymerase sigma70-holoenzyme bound to upstream fork promoter DNA and Micro... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; Q0P6L9; Q9X2V7;
MG;ZN;6n605-234
SigmaS-transcription initiation complex with 4-nt nascent RNA Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P13445;
ZN;MG;5ipm6-235
SigmaS-transcription initiation complex with 4-nt nascent RNA Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P13445;
ZN;MG;5ipn6-235
E. coli Transcription Initiation Complex - 16-bp spacer and 5-nt RNA Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
ZN;MG;4ylp6-235
E. coli Transcription Initiation Complex - 17-bp spacer and 4-nt RNA Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; A7ZTK1; P00579;
ZN;MG;4yln6-235
E. coli Transcription Initiation Complex - 16-bp spacer and 4-nt RNA Heteromer
A7ZSI4; A7ZUK1; P0A8T7; A7ZTK1; P00579;
MG;ZN;4ylo6-235
CryoEM structure of E.coli his pause elongation complex without pause hairpin Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800;
MG;ZN;6bjs5-234
CryoEM structure of crosslinked E.coli RNA polymerase elongation complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800;
MG;ZN;6alf5-234
'Escherichia coli RNA polymerase sigma70-holoenzyme bound to upstream fork promoter DNA and Capis... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; Q0P6L9;
ZN;MG;EPE;EDO;6n616-234
X-ray crystal structure of Escherichia coli RNA polymerase (RpoB-H526Y) and ppApp complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
ZN;MG;ECJ;6byu6-234
Crystal structure of CBR 9393 bound to Escherichia coli RNA polymerase holoenzyme Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; B1IYV1; P00579;
MG;42U;ZN;4xsz6-234
Crystal structure of CBR 703 bound to Escherichia coli RNA polymerase holoenzyme Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; A8ARN6; P00579;
ZN;42S;MG;4xsx6-234
Escherichia coli RNA polymerase and Rifampin complex, wild-type Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;RFP;ZN;5uac6-234
Escherichia coli RNA polymerase sigma70-holoenzyme bound to upstream fork promoter DNA Heteromer
P0A7Z6; P0A8V4; P0A8T8; P0A802; Q0P6L9;
MG;ZN;6n626-234
Escherichia coli RNA polymerase and Rifampin complex, RpoB S531L mutant Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;RFP;ZN;5ual6-234
Escherichia coli RNA polymerase RpoB S531L mutant Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;ZN;5uaj6-234
Crystal structure of CBR 9379 bound to Escherichia coli RNA polymerase holoenzyme Heteromer
A7ZSI4; A7ZUK1; A7ZUK2; A8ARN6; P00579;
ZN;MG;42T;4xsy6-234
Escherichia coli RpoB S531L mutant RNA polymerase holoenzyme in complex with Kanglemycin A Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
KNG;MG;ZN;6cux6-234
'CryoEM structure of E.coli RNA polymerase paused elongation complex without RNA hairpin bound to... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800;
MG;ZN;6flp6-234
CryoEM structure of E.coli RNA polymerase elongation complex bound with NusG Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P0AFG0;
MG;ZN;6c6u5-233
Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state Heteromer
P0A7Z6; B7MIX3; P0A8T8; B7MFL0; B7MBF0; B7MCS9; B7MCR2; P0A7W3; B7NGD4; B7MCV6; B7MCS1; B7MBZ1; B7MCT6; B7MCR3; B7MCV7; P0A7T1; B7MCS2; B7MB86; B7MIU7; B7MCS6; B7MLK7; B7MCT1; B7MAE3; A8A4M2;
6awb6-234
Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state Heteromer
P0A7Z6; B7MIX3; P0A8T8; B7MFL0; B7MBF0; B7MCS9; B7MCR2; P0A7W3; B7NGD4; B7MCV6; B7MCS1; B7MBZ1; B7MCT6; B7MCR3; B7MCV7; P0A7T1; B7MCS2; B7MB86; B7MIU7; B7MCS6; B7MLK7; B7MCT1; B7MAE3; A8A4M2;
6awc6-234
Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex Heteromer
P0A7Z6; B7MIX3; P0A8T8; B7MFL0; B7MBF0; B7MCS9; B7MCR2; P0A7W3; B7NGD4; B7MCV6; B7MCS1; B7MBZ1; B7MCT6; B7MCR3; B7MCV7; P0A7T1; B7MCS2; B7MB86; B7MIU7; B7MCS6; B7MLK7; B7MCT1; B7MAE3; A8A4M2;
6awd6-234
'Escherichia coli 6S RNA derivative in complex with Escherichia coli RNA polymerase sigma70-holoe... Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P00579;
MG;ZN;5vt06-234
CryoEM structure of HK022 Nun - E.coli RNA polymerase elongation complex Heteromer
P0A7Z4; P0A8V2; P0A8T7; P0A800; P18683;
MG;ZN;6alg5-232
Structural basis for transcription reactivation by RapA Heteromer
P0A7Z4; P0A8V2; P60240;
ZN;MG;4s206-232
A MODEL OF THE TERNARY COMPLEX FORMED BETWEEN MARA, THE ALPHA-CTD OF RNA POLYMERASE AND DNA Heteromer
P0ACH5;
1xs9249-329
'RNA polymerase alpha C-terminal domain (E. coli) and sigma region 4 (T. aq. mutant) bound to (UP... Heteromer
P0A7Z4; Q9EZJ8;
ACT;3n97250-324
E. coli RNA polymerase alpha subunit C-terminal domain in complex with CAP and DNA Heteromer
P0A7Z4; P0ACJ8;
PEG;CMP;3n4m249-322
'E. coli RNA polymerase alpha subunit CTD in complex with CAP and DNA: A(5)-tract binding site fo... Heteromer
P0A7Z4; P0ACJ8;
CMP;5ciz249-322
Structure of the E. coli alpha C-terminal domain of RNA polymerase in complex with CAP and DNA Heteromer
P0A7Z4; P0ACJ8;
CMP;1lb2250-321
STRUCTURE OF ESCHERICHIA COLI RNA POLYMERASE ALPHA SUBUNIT N-TERMINAL DOMAINhomo-4-mer 1bdf1-235
Crystal structure of E. coli RNA polymerase alpha subunit C-terminal domainmonomer NA;3k4g246-329
THE COOH-TERMINAL DOMAIN OF RNA POLYMERASE ALPHA SUBUNITmonomer 1coo249-329