- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- hetero-oligomer
- Ligands
- 11 x MN: MANGANESE (II) ION(Non-covalent)(Non-functional Binders)
- 5 x IMT- PYB- PYB- PYB- ABU- PYB- PYB- PYB- PYB- BAL- DIB: 4-AMINO-(1-METHYLIMIDAZOLE)-2-CARBOXYLIC ACID(Non-functional Binders)
IMT-PYB-PYB-PYB-ABU-PYB-PYB-PYB-PYB-BAL-DIB.12: 16 residues within 4Å:- Chain A: G.31, T.32, G.33, T.34, A.35, T.36
- Chain B: T.112, A.113, C.114, A.115, C.116, T.117, T.118, T.119, T.120
- Chain E: A.14
1 PLIP interactions:1 interactions with chain E- Hydrophobic interactions: E:A.14
IMT-PYB-PYB-PYB-ABU-PYB-PYB-PYB-PYB-BAL-DIB.13: 16 residues within 4Å:- Chain A: G.40, A.41, A.42, A.43, C.44, T.45, G.46, C.47, T.48
- Chain B: A.102, G.103, T.104, T.105, T.106, C.107, C.108
No protein-ligand interaction detected (PLIP)IMT-PYB-PYB-PYB-ABU-PYB-PYB-PYB-PYB-BAL-DIB.14: 16 residues within 4Å:- Chain A: G.70, G.71, A.72, A.73, T.74, T.75, C.76
- Chain B: A.73, T.74, T.75, C.76, C.77, G.78, C.79, T.80, G.81
No protein-ligand interaction detected (PLIP)IMT-PYB-PYB-PYB-ABU-PYB-PYB-PYB-PYB-BAL-DIB.15: 16 residues within 4Å:- Chain A: A.102, G.103, T.104, T.105, T.106, C.107, C.108
- Chain B: A.41, A.42, A.43, C.44, T.45, G.46, C.47, T.48, C.49
No protein-ligand interaction detected (PLIP)IMT-PYB-PYB-PYB-ABU-PYB-PYB-PYB-PYB-BAL-DIB.16: 16 residues within 4Å:- Chain A: T.112, A.113, C.114, A.115, C.116, T.117, T.118, T.119
- Chain B: A.30, G.31, T.32, G.33, T.34, A.35, T.36, T.37
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Suto, R.K. et al., Crystal Structures of Nucleosome Core Particles in Complex with Minor Groove DNA-binding Ligands. J.Mol.Biol. (2003)
- Release Date
- 2003-02-18
- Peptides
- Histone H3.2: CG
Histone H4: DH
Histone H2A.1: EI
Histone H2B.1: FJ - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:C
AG
ED
BH
FE
CI
GF
DJ
H
SMTL ID : 1m19.1
LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA
Histone H3.2
Histone H4
Histone H2A.1
Histone H2B.1
Toggle Identical (FJ)Related Entries With Identical Sequence
1kx3.1 | 1kx4.1 | 1kx5.1 | 1m18.1 | 1m1a.1 | 1p34.1 | 1p3a.1 | 1p3b.1 | 1p3f.1 | 1p3g.1 | 1p3i.1 | 1p3k.1 | 1p3l.1 | 1p3m.1 | 1p3o.1 | 1p3p.1 | 1s32.1 | 1zbb.1 | 1zla.1 | 2fj7.1 | 2io5.1 | 2nzd.1 | 3b6f.1 | 3b6g.1 | 3c1b.1 | 3c1c.1 | 3c9k.1 | 3c9k.2 | 3kuy.1 | 3kxb.1 more...less...3lel.1 |
3lel.2 |
3lja.1 |
3lz0.1 |
3lz1.1 |
3mgp.1 |
3mgq.1 |
3mgr.1 |
3mgs.1 |
3mnn.1 |
3mvd.1 |
3o62.1 |
3reh.1 |
3rei.1 |
3rej.1 |
3rek.1 |
3rel.1 |
3tu4.1 |
3tu4.2 |
3ut9.1 |
3uta.1 |
3utb.1 |
3x1s.1 |
3x1t.1 |
3x1u.1 |
3x1v.1 |
4h9n.1 |
4h9o.1 |
4h9p.1 |
4h9p.2 |
4h9q.1 |
4h9q.2 |
4h9r.1 |
4h9r.2 |
4j8u.1 |
4j8v.1 |
4j8v.2 |
4j8v.3 |
4j8w.1 |
4j8x.1 |
4j8x.2 |
4j8x.3 |
4r8p.1 |
4wu8.1 |
4wu9.1 |
4xuj.1 |
5bnv.1 |
5bnx.1 |
5bo0.1 |
5bs7.1 |
5bsa.1 |
5cp6.1 |
5dnm.1 |
5dnn.1 |
5gsu.1 |
5gt0.1 |
5gt3.1 |
5hq2.1 |
5ja4.1 |
5kdm.1 |
5nl0.1 |
5nl0.2 |
5oxv.1 |
5oy7.1 |
5x0x.1 |
5x0y.1 |
5xf6.1 |
5z3l.1 |
5z3o.1 |
5z3u.1 |
5z3v.1 |
6esf.1 |
6esg.1 |
6esh.1 |
6esi.1 |
6fml.1 |
6iro.1 |
6jyl.1 |
6k1p.1 |
6kiu.1 |
6kiv.1 |
6kiw.1 |
6kix.1 |
6kiz.1 |
6nj9.1 |
6nn6.1 |
6nog.1 |
6nqa.1 |
6r1u.1 |
6r25.1 |
6s01.1 |
6t9l.1 |
6tda.1 |
6ugm.1 |
6uh5.1 |
6uxw.1 |
6ven.1 |
6vyp.1 |
6vyp.2 |
6wz5.1 |
6wz9.1 |
6x0n.1 |
6x59.1 |
6x5a.1 |
6xjd.1 |
7a08.1 |
7at8.1 |
7cro.1 |
7crp.1 |
7crq.1 |
7crr.1 |
7jzv.1