SMTL ID : 3cg9.1

Crystal structure of the complex of peptidoglycan recognition protein with methyloxane-2,3,4,5-tetrol at 2.9 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-tetramer

Ligands

2 x RAM: alpha-L-rhamnopyranose(Non-covalent)

RAM.1: 6 residues within 4Å: Chain A: H.37, A.39, N.110, M.112, L.153, S.154 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.37, A:L.153 RAM.2: 5 residues within 4Å: Chain B: H.37, A.39, T.152, L.153, S.154 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:H.37, B:T.152, B:L.153, B:S.154

1 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.3: 10 residues within 4Å: Chain C: H.37, A.39, T.152, L.153, S.154 Chain D: H.37, A.39, T.152, L.153, S.154 7 PLIP interactions: 3 interactions with chain D, 4 interactions with chain C Hydrogen bonds: D:L.153, D:S.154, C:T.152, C:L.153, C:S.154 Salt bridges: D:H.37, C:H.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sharma, P. et al., Crystal structure of the complex of peptidoglycan recognition protein with methyoxane-2,3,4,5-tetrol at 2.9 A resolution. To be Published

Release Date

2008-04-01

Peptides

Peptidoglycan recognition protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Peptidoglycan recognition protein

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