SMTL ID : 3ebp.1

Glycogen Phosphorylase b/flavopiridol complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x CPB: 2-(2-CHLORO-PHENYL)-5,7-DIHYDROXY-8-(3-HYDROXY-1-METHYL-PIPERIDIN-4-YL)-4H-BENZOPYRAN-4-ONE(Non-covalent)

CPB.1: 10 residues within 4Å: Chain A: N.284, F.285, L.380, E.382, H.571, E.572, A.610, G.612, Y.613, R.770 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.285, A:L.380, A:E.382, A:Y.613 Hydrogen bonds: A:N.282 Water bridges: A:G.612 pi-Stacking: A:F.285, A:F.285, A:Y.613 CPB.2: 10 residues within 4Å: Chain B: N.284, F.285, L.380, E.382, H.571, E.572, A.610, G.612, Y.613, R.770 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:F.285, B:L.380, B:E.382, B:Y.613 Hydrogen bonds: B:N.282 Water bridges: B:G.612 pi-Stacking: B:F.285, B:F.285, B:Y.613

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsitsanou, K.E. et al., Sourcing the affinity of flavonoids for the glycogen phosphorylase inhibitor site via crystallography, kinetics and QM/MM-PBSA binding studies: Comparison of chrysin and flavopiridol. Food Chem.Toxicol. (2013)

Release Date

2009-09-01

Peptides

Glycogen phosphorylase, muscle form: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glycogen phosphorylase, muscle form

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