SMTL ID : 3nfm.1

Crystal Structure of the complex of type I ribosome inactivating protein with fructose at 2.5A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: V.208, T.226, N.227, T.229 No protein-ligand interaction detected (PLIP)

1 x FRU: beta-D-fructofuranose(Non-covalent)

FRU.2: 7 residues within 4Å: Chain A: Y.70, G.109, N.110, Y.111, I.155, E.160, R.163 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Y.70, A:N.110, A:Y.111, A:E.160, A:R.163, A:R.163 Water bridges: A:E.112

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: L.6, A.9, L.129, P.130, A.175, Y.176 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.6, A:A.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kushwaha, G.S. et al., Crystal Structure of the complex of type I ribosome inactivating protein with fructose at 2.5A resolution. To be Published

Release Date

2010-06-30

Peptides

Ribosome inactivating protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosome inactivating protein

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