SMTL ID : 3njs.1

Crystal structure of the complex formed between typeI ribosome inactivating protein and lactose at 2.1A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 3 residues within 4Å: Chain A: T.226, N.227, T.229 No protein-ligand interaction detected (PLIP)

1 x BGC- GAL: beta-D-galactopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-GAL.2: 9 residues within 4Å: Chain A: Y.70, I.71, E.85, S.108, G.109, N.110, Y.111, I.155, R.163 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.85, A:I.71, A:E.85, A:Y.111, A:R.163, A:R.163 Water bridges: A:Y.70

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: L.6, A.9, L.129, P.130, A.175 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pandey, N. et al., Crystal structure of the complex formed between typeI ribosome inactivating protein and lactose at 2.1A resolution. To be Published

Release Date

2010-07-14

Peptides

Ribosome inactivating protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosome inactivating protein

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