SMTL ID : 3v14.1

Crystal structure of the complex of type I Ribosome inactivating protein complexed with Trehalose at 1.70 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 11 residues within 4Å: Chain A: V.69, Y.70, I.71, F.83, G.109, N.110, Y.111, I.155, A.159, E.160, R.163 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:I.71, A:I.71, A:R.163, A:R.163 Water bridges: A:Y.70, A:E.160

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: T.226, N.227, T.229 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.226, A:N.227 Water bridges: A:N.227, A:N.231

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: L.6, G.8, A.9, L.129, P.130, A.175, Y.176 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.8 Water bridges: A:G.8, A:A.9, A:Y.176

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamini, S. et al., Crystal structure of the complex of type I Ribosome inactivating protein complexed with Trehalose at 1.70 A resolution. To be Published

Release Date

2012-01-04

Peptides

Ribosome inactivating protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosome inactivating protein

Related Entries With Identical Sequence