SMTL ID : 5gz7.1

Crystal Structure of the complex of Ribosome Inactivating Protein with 1,2-ethanediol at 1.95 Angstrom resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: T.226, N.227, T.229, S.230 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.226, A:N.227 Water bridges: A:T.226, A:N.227, A:S.230, A:N.231, A:N.231

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: L.6, G.8, A.9, L.129, P.130, A.175 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.8 Water bridges: A:A.9, A:A.9 GOL.3: 4 residues within 4Å: Chain A: N.33, T.234, I.237, Q.238 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.33, A:Q.238 Water bridges: A:N.236

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 6 residues within 4Å: Chain A: V.69, Y.70, I.71, I.155, A.159, R.163 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:V.69, A:I.71, A:I.71, A:R.163, A:R.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tiwari, P. et al., Crystal Structure of the complex of Ribosome Inactivating Protein with 1,2-ethanediol at 1.95 Angstrom resolution. To Be Published

Release Date

2016-10-26

Peptides

Ribosome inactivating protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosome inactivating protein

Related Entries With Identical Sequence