SMTL ID : 5wv1.1

Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina with ribose sugar at 1.90 A resolution.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: T.226, N.227, T.229, S.230 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.226, A:N.227, A:T.229 Water bridges: A:S.230, A:S.230, A:N.231

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: N.33, T.234, I.237, Q.238 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.33, A:T.234, A:Q.238 Water bridges: A:V.233

1 x RIB: alpha-D-ribofuranose(Non-covalent)

RIB.3: 7 residues within 4Å: Chain A: Y.70, G.109, N.110, Y.111, I.155, E.160, R.163 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:I.71, A:Y.111, A:E.160 Water bridges: A:I.71, A:G.109, A:R.163 Salt bridges: A:R.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shokeen, A. et al., Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina with ribose sugar at1.90 A resolution. To Be Published

Release Date

2017-01-25

Peptides

Ribosome inactivating protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosome inactivating protein

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